KEGG   Lacticaseibacillus rhamnosus GG: LRHM_2405
Entry
LRHM_2405         CDS       T02100                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
lrg  Lacticaseibacillus rhamnosus GG
Pathway
lrg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lrg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LRHM_2405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lrg03021]
    LRHM_2405
   03400 DNA repair and recombination proteins [BR:lrg03400]
    LRHM_2405
Enzymes [BR:lrg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LRHM_2405
Transcription machinery [BR:lrg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LRHM_2405
DNA repair and recombination proteins [BR:lrg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LRHM_2405
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Apocytochr_F_C DUF4090
Other DBs
NCBI-ProteinID: BAI42932
UniProt: A0A7S7FRU8
Position
complement(2548453..2552115)
AA seq 1220 aa
MIDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPERDGLFDERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDM
SPRSLEEIIYFASYVVIDPGDTPMEKKQLLTEREYREKREEYGQTFNAKMGAEAIKELLQ
DVDLEKEVAELKEDLKSAQGQKRTRAIRRLDILDAFKESGNDPAWMVMDTIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPWLKFYQCGVPRE
MALELFKPFVMRELVKRDMASNIKNARRKIDRQDDDVWDVLEDVIKERPVLLNRAPTLHR
LGIQAFEPVLVDGKSIRLHPLVCEAYNADFDGDQMAIHVPLSDEAMAEARMLMLAAHHIL
APKDGKPIVTPSQDVVLGNYYLTMEQKGREGEGMIFKDTNEVLMALQNGYVHLHSRVGIA
ANSFTDKPFTDEQKQKIMVTSVGKAIFNEIMPKDFPYLNEPTQDNIVNGVPDKYFIDKGE
DIHAYLEDAPLIDPFKKGFLSDIIAQVFKVYKVQRTSDLLDDMKTLGYTQSTNSGLTVGI
ADITNLKEKPEIVAAAHKKVATVSKQFRRGLITDDERHDRVIQIWNDAKDEIQQKLVDSF
DPNNPISMMSDSGARGNISNFTQLAGMRGLMAAPNGGMMEVPVISNFREGLTVMEMFMST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLVVRAIREGNEMIEPLY
DRLVGRFTMKDVLDPKTGDVLVKRNTLMDEDMAQKIVDAGVEAVTIRSVFTCNTKHGVCQ
KCYGRNMATGEQVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGGEDITQGLPRVQEI
FEARNPKGEAVITEVTGEVTAIDENPAEHTREITVKGETDTRTYSVPYASSVAVAEGDHI
NRGERLTGGSIDPKQLIKVRDVMATENYLLSEVQKVYRMQGVDIGDKHVEVMVRQMLRKI
RVMDPGDTNILPGTLLDIADFKEKNTQAIISGGIPATGRPVLLGITKASLETNSFLSAAS
FQETTRVLTDASIRGKNDPLVGLKENVIIGKIIPAGTGMATYRHEEPKSVGTVSDSVYSI
SDIEKQMKEKDNQQSDTDKQ
NT seq 3663 nt   +upstreamnt  +downstreamnt
ttgattgatgtcaataagtttgaaagtatgcaaatcggcttagcctcgccggacaagatc
cgcagctggtcttatggggaagtcaaaaagcccgaaacgatcaactatcggaccctaaag
cctgagcgggacggcttattcgatgaacgtatcttcggaccgaccaaagactgggaatgt
gcctgtggtaagtacaagcgaatccgctataagggaatcgtttgtgatcgctgcggcgtt
gaagtcacccggtccaaggttcggcgcgaacggatgggtcatattgaattagctgcaccg
gtgacgcacatctggtacttcaagggaattcctagccggatgggtctggtactcgacatg
tcgccgcgttcacttgaagaaatcatctattttgcttcctatgttgtgattgatccaggc
gatacgccaatggagaaaaagcagctgctaaccgaacgcgaatatcgcgaaaagcgggaa
gaatatggacagaccttcaatgccaagatgggtgctgaagccatcaaggaattgttgcag
gatgttgatctcgaaaaagaagttgctgaattaaaagaagacctgaaatcagctcagggt
caaaaacggacccgtgcgattcgccgtctggacattttggatgcgttcaaggagtccggt
aatgacccggcatggatggttatggacacgattcctgttattccaccggatttgcggcca
atggttcagcttgaaggcggccggtttgcgacctctgatctaaacgacttgtatcgccgg
gtcatcaaccgtaacaaccgtctgaagcgtctgcttgatctcaatgcaccaagtattatc
gtgcaaaacgaaaagcgcatgctgcaggaagcggtcgatgccttgatcgataacggtcgg
cgcggacgcccggttaccggacctggtaaccgcccgcttaagtccttgtcccacatgttg
aaagggaagcaaggccgattccgtcaaaacctgttaggtaagcgtgtcgattactctggc
cgttcggttattgatgttggcccatggttgaagttttatcagtgtggtgttccgcgtgaa
atggccttggaactctttaagccatttgtcatgcgcgaactggttaagcgcgatatggca
agcaatattaaaaatgctcgccggaagattgatcgccaagacgatgatgtctgggatgtc
ctcgaagatgtgattaaggaacggccagtccttttgaaccgtgcgcctactttgcatcga
ctgggtattcaggcatttgaacctgtcttggttgatggtaagtccattcgcttgcaccca
ctggtttgcgaagcttataacgctgactttgatggtgaccagatggcgattcacgtaccg
ctgtctgatgaagcaatggcagaagcgcgcatgctgatgctggcagcccaccacattttg
gcacctaaagacggcaagccaatcgttaccccttctcaagacgttgtgttaggtaactac
tacctgaccatggagcagaagggccgcgaaggcgaaggcatgatcttcaaggataccaat
gaagtgttgatggcgttgcaaaatggctatgttcatctgcacagtcgtgtcgggattgct
gcgaactcctttacggacaaaccgtttactgatgagcagaaacaaaagattatggtgacg
agtgtcggcaaggcaatctttaacgagatcatgccaaaagacttcccgtatttgaacgaa
ccgactcaggacaacatcgtcaatggtgtgccggacaaatacttcatcgacaaaggtgaa
gatatccatgcttaccttgaagatgcacctttgatcgatccattcaagaaaggattcctg
tctgacatcattgcccaagtcttcaaagtttataaagttcagcggaccagtgacttgctg
gatgacatgaagacactcggctatactcagtcaacgaattcaggtttgaccgttgggatt
gccgacattacgaacctgaaggaaaagccagagattgtggcggcagcccataagaaggtt
gcaacggtttctaagcagttccgtcgtggtttaatcactgacgatgaacggcatgaccgg
gtcattcagatctggaacgacgctaaagatgaaatccagcaaaaactggttgattctttt
gacccgaacaacccaatttccatgatgtctgattccggtgctcgtggtaacatctcaaac
tttactcagcttgccggtatgcgtggtctgatggctgcgcctaacggagggatgatggaa
gttcctgttatctcgaacttccgtgaaggtctaaccgttatggaaatgttcatgtcaact
cacggtgcacgtaaagggatgaccgatacggcgctgaagacggctgactcaggctacctg
acccgtcgtttagttgatgttgcccaagacgtcattgttcgcgaagaagactgcggtact
gatcgtggattggttgttcgtgcaattcgtgaaggtaacgaaatgattgaaccgctgtat
gatcgtttggttggccggttcacgatgaaagacgttcttgatccaaagactggcgatgtg
ctggttaaacgcaatacgcttatggatgaagacatggctcagaagattgtggatgctggc
gttgaagccgttaccattcgttcggtctttacctgcaacacgaagcatggtgtttgccag
aagtgctatggccgtaacatggcaaccggcgaacaggttgaagtcggtgaagctgtcggg
accgtggcggcacagtcaatcggtgaaccaggtacccagctgaccatgcgtaacttccat
accggtggtgttgctggtggcgaagatatcacgcaagggctgcctcgtgttcaggaaatc
tttgaagcacggaatcctaaaggtgaagcggttatcactgaagttactggtgaagtaacg
gcaattgatgaaaacccagccgagcatacgcgtgaaattaccgtcaaaggtgaaaccgat
acccggacttacagtgtgccatatgcatctagtgtggccgttgcagaaggggatcacatt
aaccgtggcgaacgcttaactggtggttcaattgatcctaagcaattgatcaaggtgcgc
gatgtgatggcaaccgaaaactacctgctttctgaagttcagaaagtttaccgtatgcaa
ggggttgacatcggtgataagcacgtcgaagtaatggtacggcaaatgttacgtaagatc
cgcgtcatggatccgggcgacacgaatattctgccaggcaccttgctcgacattgcggac
ttcaaggaaaagaacacgcaagcaatcatcagtggcgggatcccggcaacgggtcgtccg
gtcttgctggggattaccaaggcttctctggaaactaacagcttcttatcagctgcttcc
ttccaagaaaccacgcgtgtcttaaccgatgcatccattcgcggcaagaacgatccactg
gttggtctgaaagaaaatgtcattatcgggaagatcattccggctggtaccgggatggcc
acctatcgtcacgaggaacctaagagtgtcggtacggtttccgacagtgtttattcgatt
tcagacatcgaaaaacagatgaaggaaaaagacaaccagcaaagcgacactgacaaacag
taa

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