KEGG   Lacticaseibacillus rhamnosus Lc 705: LC705_01006
Entry
LC705_01006       CDS       T00990                                 
Name
(GenBank) Hydrolase of the metallo-beta-lactamase superfamily protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
lrl  Lacticaseibacillus rhamnosus Lc 705
Pathway
lrl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lrl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LC705_01006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lrl03019]
    LC705_01006
Messenger RNA biogenesis [BR:lrl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LC705_01006
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B RMMBL Ish1
Other DBs
NCBI-ProteinID: CAR89845
Position
complement(999626..1000954)
AA seq 442 aa
MTTIRFLNGLNTIGGNIVEFATKTSRVIMDFGVAADLSHETVASAIDNGKLPHVPELFFD
QPDSFANEAIFISHLHIDHMGALQYLQKNIPIYLSEPSYRLYQVLIRLGIEKPVANLHPL
AFESPLAIGDLTVTGFHSDHDEPGVMALLIDDGARRFAHSGDVRLNGPHADRVHAWASRF
NAEKISLFLLEGTSFSFDTPTPVEDQDHPSVPLTEMSLQTKFRQLLTDSSQLVVINPYNR
NYERMAAFQVSAHASGRQVVWEPNEAAILTAMTNQQPDAILGKTIQLTDLAQAPQQYVLQ
NSYAHLERLADLPISAYVHSNGEPLGDYDPRFAQLKDWLADHQIPLQFMNASGHATREDL
ITLAKEVNPRVIVPWHSFHPEREAEAMTRKQMQMLSYPNVIFIMTSMRSEKMMIDLSKKQ
AIHVVDVDSLLLTLKEMINGCL
NT seq 1329 nt   +upstreamnt  +downstreamnt
gtgacgacgattcgctttttaaacggtctcaataccattggcggcaacattgttgaattt
gctaccaaaactagccgggtcatcatggattttggggttgcagctgatttaagccatgaa
acggttgcctcggccattgataacggcaaattaccgcatgtcccggaactttttttcgat
caaccggattcgtttgccaatgaagccatcttcatctcgcacctgcatattgatcacatg
ggcgccttacaatatttgcagaaaaacattccgatttatctttccgaaccatcctatcgc
ctctatcaggtgctcattcgcttaggcatcgaaaaaccggttgccaatctccatccctta
gcctttgaatcgccactggcaattggcgatttgacagtaaccgggtttcacagcgatcac
gatgaacccggagtgatggcgctgttgattgatgatggtgcgcgccgctttgcccattcc
ggggacgttcgcctcaatggcccgcatgccgatcgcgtgcacgcctgggctagccgtttc
aatgctgaaaagatcagtctcttcttgcttgaaggcactagcttttcgtttgatacaccg
acaccagttgaagatcaggatcatccaagtgtgccactgaccgaaatgagcctgcaaact
aaatttcgccaattgctgactgacagctcgcaactggttgtcattaacccttacaatcgc
aattatgagcggatggcagccttccaagtttcagcgcatgcaagcgggcgtcaggtggtg
tgggagcctaacgaagcggcaattttaactgcaatgaccaaccagcagcctgatgcgatt
cttggcaaaacaatccagttaactgaccttgcacaggcgcctcaacaatatgttctgcaa
aatagttacgcgcaccttgaacggttggcagacttaccaatcagcgcttatgtacacagt
aacggtgaacctttgggggattacgatccgcggtttgctcagctgaaggattggttggcg
gaccatcaaattcctttgcagtttatgaatgcttccggccatgcaactcgcgaggactta
atcacgttggctaaagaagtgaacccccgggtgatcgtgccgtggcatagctttcacccg
gaacgtgaagctgaggcgatgacgcggaaacaaatgcagatgttgtcttacccgaacgtg
atctttattatgacttcgatgcgctcggagaagatgatgattgatctatctaaaaagcag
gctattcacgttgttgacgtggacagcctgcttttaactttgaaagagatgatcaacggt
tgtctgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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