KEGG   Lacticaseibacillus rhamnosus Lc 705: LC705_01094
Entry
LC705_01094       CDS       T00990                                 
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lrl  Lacticaseibacillus rhamnosus Lc 705
Pathway
lrl03420  Nucleotide excision repair
lrl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lrl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LC705_01094 (pcrA)
   03430 Mismatch repair
    LC705_01094 (pcrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lrl03400]
    LC705_01094 (pcrA)
Enzymes [BR:lrl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LC705_01094 (pcrA)
DNA repair and recombination proteins [BR:lrl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LC705_01094 (pcrA)
   MMR (mismatch excision repair)
    Other MMR factors
     LC705_01094 (pcrA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C PcrA_UvrD_tudor AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_12 AAA_11 Terminase_6N ResIII
Other DBs
NCBI-ProteinID: CAR89933
Position
1077000..1079252
AA seq 750 aa
MVMDAALKGMNDKQAEAVLATEGPVLIMAGAGSGKTRVLTHRIAYLVEEKNVNPWNILAI
TFTNKAAREMRERVGKLVDPEIARDIWVSTFHALCVRILRRDIDKLGYNRAFTIADPAEQ
LTLVKHILADFNLDPKRYDPKSILGAISGAKNELIDPQTYSDEQANSPFTKTVAQVYAEY
QKRLRSDQALDFDDLIMQTIVLFEKDPETLGFYQRKFRYIHVDEYQDTNEAQYRLVHMLA
EGYHNLCVVGDADQSIYGWRGANMQNILDFKKDYPKAQVILLEQNYRSTKTILSAANDVI
KNNLNRQAKTLWTENATGDKITYYRAQSETDEAIFVIRRIEAEMAEHHRKYGDFAILYRT
NAQSRAIEEAFVKSNIPYKMVGGHKFYDRKEIRDALAYFRLVVNPDDDMSFNRIVNEPKR
GIGNTSVAKLEAFANQHDWSLLEAAANAELSPISGKARGNLAQFGKMIQRLGQRRKDLNV
TEMMQAILDDSGYLGTLRAANTLEAETRVENLEELLSVTQGFDARYQPENEDSDIFVDFL
AELALLSDQDEVEEDAQEVTLMTLHAAKGLEFPVVFLVGMEEGLFPLSRAAMDEGELEEE
RRLAYVGITRAKQKLYLTNAYARMLYGQRQNNPASRFIEEIDPELLDISGAAQPKSDIPF
INRTDRAFSSPYSRHPETTGTPVTVKPAPTTGAGKTSWEAGDKVEHRKWGIGTVVKVTGT
GDDQELDIAFKAMGIKRLLAAFAPIKKVEA
NT seq 2253 nt   +upstreamnt  +downstreamnt
atggtaatggatgccgcattaaagggtatgaatgataagcaggcagaggcggtgttagcc
actgaaggaccggttttgattatggcaggggccggttctggcaagacgcgggttttgacc
caccgaattgcttatttagttgaagaaaaaaacgttaatccatggaacattcttgccatt
acgtttacgaacaaggctgcgcgggaaatgcgggaacgggtgggtaaactggtcgatcct
gaaattgcccgcgatatttgggtttcaacgttccacgcattgtgtgttcgtattttgcgg
cgcgacattgacaaactcggttacaatcgggcgtttacgattgctgatccagccgaacaa
ctcactttggttaagcacattttggctgacttcaatctggatcccaagcgttatgatcct
aagtcgattcttggcgcgatttcgggtgccaaaaacgaactaatcgacccgcaaacttac
tcagacgagcaggccaacagcccatttaccaaaactgtggcccaagtttacgcggaatat
caaaaacgcctgcgcagtgatcaggcactggactttgatgatctcatcatgcagaccatt
gtgttatttgaaaaggatcccgaaacgctcggcttttaccagcgcaaattccggtatatt
cacgttgatgagtatcaggatacgaacgaagcccaatatcgcctcgtgcatatgctggcg
gaaggttatcacaatctgtgcgtggtcggggatgccgatcagagtatttacggttggcgc
ggcgctaatatgcaaaacattctggactttaaaaaggattaccctaaagcccaagtcatt
ttgcttgagcagaattatcgctcaaccaagacaatcctgagtgctgccaatgatgtgatt
aaaaacaacttgaatcgccaggccaaaacgttatggacggaaaatgccaccggcgacaag
atcacgtattatcgggctcaaagcgaaaccgatgaagccatttttgtgattcgccgcatt
gaagcggaaatggcagaacatcaccgcaagtacggggactttgcgattttatatcggaca
aacgcccaatcccgtgcgattgaagaagcgttcgtgaagtccaacattccttataaaatg
gtgggcggacataaattctatgatcgtaaggaaattcgcgatgccttggcttatttccgg
ttggtcgtcaatccggatgatgatatgagctttaatcggatcgtgaatgaacctaagcgc
gggattggcaatacaagtgttgctaaactggaagcctttgctaatcagcatgattggtca
ctcttggaagcagcggcaaatgctgagcttagtccgatttcaggcaaagcccgcggcaat
ctagcccaattcggtaaaatgattcaacgacttggtcagcggcggaaagatttgaacgtt
acggaaatgatgcaggcaattctggatgatagcggttatttagggacgttacgtgccgcc
aacaccttggaagccgaaacgcgagtggaaaaccttgaagaacttttgtcagtgacccaa
ggatttgatgcgcgctaccagccagaaaatgaagacagtgatatttttgtcgacttttta
gctgaattggcgctgttgtctgatcaagatgaagttgaagaagatgcccaggaagtgacg
ttgatgacgttgcatgcggctaagggactggaatttccagtggtctttctggtgggcatg
gaagaagggcttttcccgttgagtcgcgcggccatggatgaaggcgagcttgaagaagag
cggcgattggcttacgtcgggatcacccgagcaaaacaaaagttatatttgaccaatgcc
tatgcccggatgttgtatggtcagcgtcaaaataatccggcgagccgttttattgaagaa
attgatcctgaattgcttgatatttccggtgctgcccagccgaaaagtgatataccgttc
atcaaccgcaccgatcgcgcctttagttcgccttatagccgtcatcctgaaaccaccggg
acgccggtaaccgttaaaccggctccaaccactggtgccggtaagacaagctgggaagcc
ggcgataaagtcgaacaccgtaaatggggaatcggtaccgtggtcaaagtaaccggcacc
ggtgacgatcaggaacttgatatagcctttaaagcgatggggattaaacggttattagct
gcgtttgccccgattaaaaaagttgaagcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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