KEGG   Lacticaseibacillus rhamnosus Lc 705: LC705_02503
Entry
LC705_02503       CDS       T00990                                 
Symbol
clpC
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
  KO
K03696  ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lrl  Lacticaseibacillus rhamnosus Lc 705
Brite
KEGG Orthology (KO) [BR:lrl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:lrl03110]
    LC705_02503 (clpC)
Chaperones and folding catalysts [BR:lrl03110]
 Heat shock proteins
  HSP100
   LC705_02503 (clpC)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 Clp_N AAA ClpB_D2-small AAA_5 AAA_16 Sigma54_activat AAA_22 IstB_IS21 nSTAND3 AAA_18 ATPase_2 AAA_14 bpMoxR TniB RuvB_N UVR Mg_chelatase AAA_7 AAA_24 NACHT Zeta_toxin TsaE RNA_helicase DNA_pol3_delta2 AAA_28 Torsin
Other DBs
NCBI-ProteinID: CAR91342
Position
complement(2540749..2543256)
AA seq 835 aa
MDNLFTPSAKNVLLLAQEQAKYFHHHAVGTEHLLMALVMEKDGIAGKTLRQLGVTENDVH
DEIERFTGYGTVDAASQASDSYLPYSPKGKEILAFAGDEAKRLGALKIGTEHILLGLLRE
DDILAARILQNLGLSLSKTRQMVFKKMGIADTAAKRRPMARGGARQDGQGTPTLDGLARD
LTQMARENRMDPVVGRDKEVRRLIQILARRTKNNPVLIGEPGVGKTAIAEGFAEKIVAGK
VPDDMLNKRLMMLDMGSLVAGTKYRGEFEDRLKKIIDEIYKDGNVILFIDELHTLIGAGG
AEGAIDASNILKPALARGELQLIGATTLDEYQKYIEKDAALERRFATIQVDEPTEEEAEQ
ILKGLRPRYEAHHGVTITDEALHEAVVLSSRYITTRFLPDKAIDLVDESAAKVRLDKANV
ETKADKLQDELAKLVADKEDAIDHQDFETAATIRTKEAGVKAKLADTPEPVNESGVRTDI
KVTGADVAEVVSQWTGVPVTQLQKKESERLVNLEKILHQRVVGQDEAVSAVARAIRRARS
GLKDPTRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDAMIRVDMSEYMEKFSTSRLIGA
APGYVGYDEGGQLTEKVRNKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDAKGRRVDF
RNTILIMTSNIGATAIRDDKTVGFGAKDPTADFNAMKSRMLAELKKSFRPEFLNRIDETV
VFHSLNKAELHEIVKIMTKTVLSRIKDQGIDVKITPAGIDAIAAAGFDPEYGARPIRRAL
QTDVEDQLSELLLTGQAKTGDLIQIGAKKGKLTFTVKENKGKHKENGASKEPVKA
NT seq 2508 nt   +upstreamnt  +downstreamnt
atggacaacttatttacccctagtgctaaaaatgtgttgcttttagcccaggaacaagcg
aagtacttccatcatcatgctgttggcacggaacacttgcttatggctttggttatggaa
aaggatggtatcgctggtaagacgctgcgtcagttaggggtcacagaaaatgatgtccat
gacgagatcgagcgcttcacaggatatggaactgttgatgccgccagtcaagctagcgat
agttatttgccatactcaccaaaaggcaaggaaattctggcatttgccggggacgaagca
aaacgcttaggggcgttaaaaatcggcaccgagcatattctgctgggactattgcgagaa
gacgatattttagctgcgcggattttacaaaacttagggctcagtctctcgaagacgcgt
cagatggtcttcaagaaaatgggcattgcggatacggcggcaaagcggcggccaatggca
cgtggcggcgctcgccaagacggtcaggggacaccaacgcttgatggcctcgcccgtgat
ctaacccagatggcgcgcgaaaatcggatggatccggtggttggtcgcgacaaagaagtt
cggcgcttgattcaaatcttggctcggcgcactaagaacaacccggtcttgattggtgaa
cccggtgtcggcaaaacggccattgcagaaggcttcgctgaaaaaattgtggctggaaaa
gtgccggatgatatgctgaacaaacgcttgatgatgcttgacatgggttcgttggttgca
ggcactaagtatcgtggtgagtttgaagatcggctgaagaaaattattgatgagatttat
aaagatggcaatgtcattttattcatcgatgaattgcacacattgatcggtgctggcggt
gctgaaggggcaattgacgcttcaaatatcctgaaaccggcattggcacgtggcgagctt
cagctaatcggcgccacgactttagatgaatatcaaaagtacattgaaaaagatgcggcc
ttggagcggcggtttgcaacaattcaagttgacgaaccgactgaggaagaagccgaacag
attctgaaaggtttgcgtccgcgttacgaagcacaccatggcgttacgattaccgatgaa
gcgctgcatgaagcggttgtgttgtcgtcacgttacattacaacgcgttttcttccggat
aaggctattgacttggtcgatgaaagtgcggctaaagttcgccttgataaagctaacgtg
gagaccaaagctgataaacttcaggatgaattagctaaactggttgccgacaaagaagat
gcaattgatcatcaagacttcgaaacggctgctacaatccggactaaagaagcgggcgtc
aaggctaaacttgccgatacgcctgaaccggtgaatgaaagtggtgttcgtaccgatatc
aaggtcacgggcgcagacgttgccgaagttgtatcgcaatggaccggcgtgccggtcacg
caactgcagaaaaaggaatctgaacggttggttaatctcgagaagattctgcatcagcga
gttgttggccaggatgaagccgtttcagcagttgcacgggcaattcggcgtgctcgttcc
gggttgaaggatccgaccagaccgattggctccttcatgttcttgggaccaaccggcgtc
ggcaaaaccgaattagctaaagcgttggcagaagcgatgtttggttccgaggacgccatg
attcgggtcgatatgtccgagtatatggagaaattcagtacgagccggttaatcggcgca
gcgccaggctatgtcggttatgacgaaggcggtcaattgacggaaaaggttcgcaacaag
ccatattcggtcgttttactcgatgaagttgaaaaggcgcatcctgatgtcttcaacatt
ttgttacaagtcttggatgatggctatttaaccgatgctaagggtcggcgggtcgatttt
cggaataccattttgattatgaccagcaatatcggagcaactgccattcgcgatgataag
acagttggatttggtgcaaaagatccaacagccgacttcaatgccatgaagagtcggatg
ttggctgaactgaaaaagagcttccgtccagaatttcttaatcgaattgacgaaactgtt
gtcttccatagcttgaacaaggctgagttgcatgagatcgtcaagattatgaccaaaacc
gtgcttagtcgtatcaaagatcaaggaattgacgttaaaattacgccagccgggattgat
gcgattgccgcggctgggtttgatcctgaatatggtgcgcgcccgatccgccgtgccttg
caaacggatgttgaagaccaactcagtgagctattgctgacgggtcaggctaaaaccggt
gatttgattcaaatcggcgctaaaaaaggcaagctgacgtttacagtcaaggaaaacaaa
ggtaagcataaagaaaacggcgcttctaaagaacctgtcaaggcatga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (28)   
   Pfam (28)   
All databases (34)   

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