KEGG T01626: LRC

Lactobacillus ruminis: LRC_12750

Entry

LRC_12750 CDS T01626

Definition

exodeoxyribonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

lrm Lactobacillus ruminis

Pathway

lrm03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:lrm03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 PhoH UvrD_C AAA_12 AAA_22 T2SE AAA_16 AAA_14 AAA_28 AAA_29 AAA_17 AAA Helicase_RecD UPF0079 AAA_18 NTPase_1 Mg_chelatase DUF258 HHH DUF2075

Other DBs

NCBI-GI:

347525720

NCBI-GeneID:

11141124

UniProt:

G2SPT0

Position

complement(1327587..1329974)

AA seq 795 aa
MTEHVKGKAVHIFFEAPNSFYKVLLVKIKEASFQWSEKQITVVGNFADIIEGNEYSFEGR
LTKHARYGMQFQAQNYKSETLATTDGVVSYLSSDIFPGIGKKTAEHIVNVLGKNAINVLL
SDEDKVETLGLSERQKGVLMQGIIENNGTEQTIIELNNLGFSSRITEDIFSRYQEKSLEV
IRKDPYSLATEIRGLGFKRIDQIAQGMGISFDDQKRILGAVLTSLYEECYSNGNTYVNDK
LLLEKSLQLLEGARSEKVDPEKVADTIIEAGHKRKVVIEGKRIYPKSLYNSEQEIAYDLY
RLMNNRDEPIEYDEDEIDRCLEDVQAELSITYGQDQLQAIKDAIKSPVFLLTGGPGTGKT
TILRGITEVYMKLNKIDREDAKGIKLAAPTGRAAQKMANATEMDASTIHHLLGITGGNEI
SANDLDYLNGTLLIIDESSMVDTELMHMLLSCIPDSMQVIFCGDKNQLPSVGPGRVFADM
LESMQIPSKELTHIYRQGDGSSIVKLSRSIVNGEVPSDLLEKTGDRSFIKCSGEQVCSVT
KRIVQIVLKKGQNADDIQVLAPMYMGPAGINQLNRTLAPLMNPTRLNAKSVESGENEFHI
GDRVLQLQNNPEKNIFNGDIGKIIAINEPQKGRGTTMTVRFEGREVELEQADFLNLTLAY
CMSIHKSQGSEFPIVILPMVRQYSRMYARNLLYTALTRAKLKLMLIGEPSAYVNCIRAEA
LNRETMLKQQIVFQFTGKKSKTNPQEKSVQLEAKNDFADVDPSRGSIQKTILNFDNIEKI
DPLIGMEGIDPYQFI

NT seq 2388 nt +upstreamnt +downstreamnt
atgaccgaacacgttaagggaaaagcggtgcatatcttttttgaagcaccaaacagtttt
tacaaggttcttttggtgaaaattaaggaagcaagttttcaatggagcgaaaagcaaata
accgtagtcggaaattttgctgacatcattgaaggaaacgagtattcgttcgaagggcgt
ttaaccaaacatgcacgttatggaatgcagtttcaagcacaaaattataaatctgaaacg
cttgcgacgaccgatggggtggtttcgtatctgtcatcggatattttccccggaatcggc
aaaaaaacagctgaacatatcgtgaacgttttaggaaaaaacgcaatcaacgtgcttctt
tcagacgaggacaaggtcgaaacgcttggcttgagcgaacgccaaaaaggcgttttgatg
cagggaataattgaaaacaacgggactgaacaaacgataatcgagctcaacaatctgggt
ttttcaagtcggattaccgaagacatcttttcgcgttaccaggaaaaatcgttggaagtt
atccggaaagatccatacagtttggcaaccgagattcgcggattgggatttaagcgcatc
gaccagatcgcgcaaggaatggggatttcatttgatgatcaaaagcgaatccttggtgcc
gttttaacttccttgtatgaagaatgctattcaaatggcaacacttatgtcaatgataag
cttttgctcgaaaaatccttgcagcttttggaaggagcacgttctgaaaaggttgatccc
gaaaaagtagctgatacgattatcgaagcaggacataaacgcaaagtagtaatcgaagga
aagagaatatatccgaaatccctttacaattccgaacaagagattgcttatgatctttat
cgcttgatgaataatcgcgatgaaccgattgaatatgacgaagatgaaattgatcgttgt
cttgaagacgtccaggctgaacttagcattacctatggtcaagatcagcttcaggcaatc
aaggatgccattaaatcaccggtttttcttttgactggcggtccaggtacggggaagaca
acgatacttcgagggattaccgaagtttatatgaaactcaataaaattgacagggaagac
gcaaaggggataaagctggctgcgccgacaggacgggctgcgcaaaaaatggccaatgcg
accgagatggatgcttcgacgattcatcatctgctcggaattactggaggcaatgagatt
tccgcaaatgatttagattatttgaatgggacgttgctgattattgacgagtcatcgatg
gtcgatacggaattgatgcatatgcttctttcctgcattcctgacagcatgcaggtcatc
ttttgcggtgataaaaatcagcttccttcggtcggacctggccgagtttttgccgatatg
cttgaaagcatgcagatcccgtcaaaagaattgacgcatatttaccgtcaaggcgacggt
tcttcaatcgttaaactgtcgcgcagtatcgtaaatggcgaagttccatcggatcttttg
gaaaaaaccggtgaccgttcttttataaaatgcagtggcgagcaggtctgcagcgtgacg
aagagaatcgttcagattgtcttgaagaagggacaaaatgcggatgatattcaagttttg
gcaccgatgtacatgggacccgccggaatcaatcaattgaaccgcacgcttgccccgttg
atgaatccaacaagactgaatgctaaaagcgtagagtctggggaaaatgaatttcatatc
ggtgaccgtgttttgcaattgcaaaataatcctgaaaagaatatttttaatggtgatatc
ggcaagatcattgcaatcaatgagccgcaaaaaggacgcgggacaacgatgacggtcaga
tttgaaggacgtgaagtcgagctcgaacaagctgactttttaaatttgactttggcctac
tgcatgtcgattcacaaatctcaaggcagcgaatttccgattgtgattttgccaatggtc
agacaatattcgcggatgtatgcaagaaacttgctttatacggctttgacgcgtgctaag
ctcaaattaatgctgattggcgagccgagtgcttatgtcaattgtattcgtgctgaagct
ttgaatcgtgagacgatgctgaaacaacagattgtttttcaatttaccggaaaaaaatct
aaaacgaatcctcaggaaaagtcggttcagcttgaagccaaaaatgattttgctgatgtc
gatcctagtcgtggcagtattcaaaagacgattttgaattttgacaatattgagaaaata
gatccattaatcggaatggaagggattgatccttatcagttcatataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (25)   
   Pfam (25)   
All databases (34)   

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