KEGG   Lactobacillus reuteri SD2112: HMPREF0538_20260Help
Entry
HMPREF0538_20260  CDS       T01551                                 

Gene name
fpg
Definition
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lru  Lactobacillus reuteri SD2112
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lru00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    HMPREF0538_20260 (fpg)
Enzymes [BR:lru01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     HMPREF0538_20260 (fpg)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     HMPREF0538_20260 (fpg)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(246356..247186)
Genome map
AA seq 276 aa AA seqDB search
MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVEDFRQALIGQTIENVDRRGKYL
LFRFTNDLTMISHLRMEGKYYNQPIGGPIDKHTHVVFEFTDGTELCYQDTRKFGRMTLVK
TGDEMNVGGLKTIGPEPTEDAFTLPYFTAELKKSRGKIKPFLLNQRHVAGLGNIYVDEVL
WMTGINPEQPANTLTASQITELRKNIIKELATAIKYKGTTVHSFTNAFGDAGAFQDRLKA
YGHAGDECPRCGTKMVKIKVAERGTTFCPHCQVLKE
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaagttgaaactgttcgccgcggtttgctgaagattgccgctaag
cgtaaaattaacgcgatcgatgtttattatggtaaaacgattaccaatgacgttgaagat
tttcggcaggcgttgattggacagacgattgaaaatgttgatcggcgagggaaatatctt
ctttttcgttttactaatgatttgacgatgatttcacaccttcgcatggaaggaaaatat
tacaaccaaccgattggcggaccaattgataaacatacccatgttgtctttgaatttacg
gacggcacggaattatgttatcaagatacccgtaaatttggtcggatgacactggtaaaa
accggtgatgagatgaatgtcggcggattgaagacgattggccctgaaccgacggaagac
gcctttacgttgccatactttacagctgaattaaaaaagagtcggggaaagattaagcca
ttcttgcttaatcagcgtcatgtcgccggtctgggtaacatttacgttgatgaggtacta
tggatgacggggataaatccggagcaaccagccaatactttaacggctagccagattact
gaattacggaaaaatattatcaaagaattggcgacagcgattaagtacaagggaaccact
gtgcatagttttacgaatgcatttggtgatgccggcgctttccaagatcgcttaaaagct
tatggtcatgcgggggatgaatgtccgcgttgtggcacgaaaatggttaaaattaaggtt
gctgaacgtggaacgacattttgtccacactgtcaagtattgaaggaataa

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