KEGG   Luteibacter rhizovicinus DSM 16549: BJI69_03505
Entry
BJI69_03505       CDS       T04563                                 
Name
(GenBank) DNA polymerase domain-containing protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
lrz  Luteibacter rhizovicinus DSM 16549
Pathway
lrz03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:lrz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BJI69_03505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lrz03400]
    BJI69_03505
Enzymes [BR:lrz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BJI69_03505
DNA repair and recombination proteins [BR:lrz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BJI69_03505
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_primase_S
Other DBs
NCBI-ProteinID: APG03062
UniProt: A0A0G9H7F1
Position
complement(736967..737839)
AA seq 290 aa
MEPLIVDGVAITHPDREVFGDGGPTKGDVATYYEAVAPHMLPELRGRPLSVVRCPRGTSG
ACFFQKHHASALGRHVKAVALKEKDGGDAEYLYVDDVEGVLELVQMNTLEFHPWGARVDK
PDQPDRLIFDIDPSEGVDWKAIVACAREIRERLQGQGLESFVRTSGGKGLHVVVPFRRGP
AWGKVKAFCEGIADAMVADSPQGYIAEASKAKREGLIFIDWLRNTRGATSVTGWSLRARP
GAPVAMPLRWDEIARLKGGGAFDMAKALKRARSSETDPWEGIASLKQALP
NT seq 873 nt   +upstreamnt  +downstreamnt
atggagccgctgatcgtcgacggcgtcgccatcacccacccggatcgggaggtgttcggc
gatggcggcccgaccaagggcgatgtcgccacctactacgaggcagtggcaccgcacatg
ctgcccgagcttcgcggccgaccgctatcggtcgtccgctgccctcggggcaccagcgga
gcctgtttcttccagaagcaccatgccagtgcgctcggcaggcacgtcaaggcggtagca
ctgaaagagaaggacggcggcgacgcggagtacctgtatgtcgacgacgtcgaaggcgtg
cttgagctcgtccagatgaacacgctcgagttccatccctggggtgcccgcgtggacaag
cccgatcaacccgatcgactcattttcgacatcgatccgtccgagggcgtcgactggaaa
gccatcgtggcctgcgcacgcgagatccgcgagcgactccagggccagggcctggaaagc
ttcgtccgcacgtcgggtggcaaaggcctgcacgtggtcgtgccctttcggcgtggtccg
gcatggggcaaagtcaaagccttctgcgaaggcatcgcggacgcgatggtcgccgacagt
ccgcagggctacatcgccgaagcgagcaaggccaagcgcgagggactgatcttcatcgac
tggctgcgcaatacgcgcggcgccacgagtgtcacgggatggtcgttgcgtgcgcgtccg
ggggccccggtggcgatgcccttgcgctgggacgagatcgcccggctgaagggcgggggt
gccttcgacatggcaaaggccctgaagcgggccaggtcgagcgagacggatccgtgggaa
ggcatcgcgtcgttgaagcaggcgttgccgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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