KEGG   Lactobacillus sakei: LSA1405Help
Entry
LSA1405           CDS       T00299                                 

Gene name
fpg
Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lsa  Lactobacillus sakei
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lsa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LSA1405 (fpg)
Enzymes [BR:lsa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LSA1405 (fpg)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LSA1405 (fpg)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1371107..1371943)
Genome map
AA seq 278 aa AA seqDB search
MPELPEVENVRRGLETLAVGKTVSAIDIRWSKIIVNPDEVFTAGLVGQQITAVDRRGKYL
LIRFGEQLTVVSHLRMEGKYEVVAKEAPISKHTHVIFEFTDGQQMRYLDTRKFGRMQLIE
TGQENTVAGLKDLGPEPTPTTFLKADFYQRLQKHHKAIKPLLLDQKVVTGLGNIYVDETL
WLSHIHPETPANDLTRAETDRLHDEIIAELELAINHGGTTVNTFLNATGHAGAFQEMLHV
YGKKGVPCERCGTPIEKIKVAQRGTHFCPKCQIKRNAK
NT seq 837 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaagtcgaaaatgtccgccggggacttgaaaccttagcggttggt
aaaactgtttcagcaatcgatattcgctggtcgaaaatcattgttaatccagatgaagtc
tttactgctggattagtgggccaacagattacagctgttgatcggcgggggaaatattta
ctgattcgttttggagaacagctaactgttgtcagccatctgcgaatggaaggtaagtat
gaagtggtcgccaaggaggcaccgatttccaaacatacgcacgtgatttttgaattcacg
gatgggcaacagatgcgttacctagatacgcggaagtttgggcggatgcagttgattgag
accggtcaggaaaatacggtagctggcttgaaggacctagggccggaaccaacaccgacg
acctttttaaaggcggacttctatcaacggttgcaaaaacatcacaaagctatcaagcca
ttattattggatcaaaaggttgtgaccggtctaggcaatatttatgtcgatgaaacgttg
tggttaagccatattcatccagaaacaccagccaatgacttgacgcgtgctgaaacggat
cgcctccacgatgagattattgctgaattagaactagcgattaatcatggtgggacaacg
gttaacacgttcttgaacgcgaccggtcatgctggcgccttccaagaaatgctgcatgtt
tacggcaaaaaaggggttccttgcgaacgatgtgggacacccatcgagaaaattaaagtg
gcacagcgggggacgcatttttgtccaaagtgtcagattaaaaggaatgcaaaataa

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