KEGG   Listeria seeligeri: lse_1424
Entry
lse_1424          CDS       T01184                                 
Name
(GenBank) helicase, RecD/TraA family
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
lsg  Listeria seeligeri
Pathway
lsg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lsg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    lse_1424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsg03400]
    lse_1424
Enzymes [BR:lsg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     lse_1424
DNA repair and recombination proteins [BR:lsg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     lse_1424
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_4 SH3_13 UvrD_C_2 AAA_11 Viral_helicase1 AAA_22 AAA_16 UvrD-helicase AAA_12 AAA_28 NTPase_1 nSTAND3 TsaE SLFN-g3_helicase Zeta_toxin AAA_17 AAA AAA_18 T2SSE ABC_tran DEAD
Other DBs
NCBI-ProteinID: CBH27575
Position
complement(1452566..1454959)
AA seq 797 aa
MAEQESLALFDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFFP
ALHEQEVYTFYGKMQEHAKFGQQFKAERFRKEMPQSRAGLINYLSGELFKGIGKVTAENI
VDTIGDDAITRILSDPSLLNTVPKLPSGAAESLLASLQENQGLEHVMVGLNEYGFGPQLS
MKIFQAYKQNAIEVLENNPYKLIEDVKGIGFQRADELGRKLGLGGNHPERLRAGILFMLD
SVCMQQGHVYMEQEALLAEVTYLLEESEGVRIDQAILMEQVEKLAEEQKIITENTRVYMP
SLYYSESGFAYHVKRMLKQTEYQEQFPQSEFLLALGELEERIGVHYGDSQREALAQALMS
PMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKDGATFPVLLAAPTGRAAKRMSE
STGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQV
VLVGDQDQLPSVGPGQVLKDILHSKQIPTVALSDIYRQKDGSSIIEMAHNIKEGMLPADF
TKNSADRSFFHCTVNQIGDVVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQE
IFNPNDTGRRKEVQFGELKYRVHDKVLQLINQPEKNVFNGDIGEIISIIYAKENTEKQDM
IVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTGV
TRSKQFLILCGEEEAFRMGVERVDENKRNTTLSERLTSEDVMLEQMTNKRILTVENIMEI
DPMIGMEGITPDQFMAG
NT seq 2394 nt   +upstreamnt  +downstreamnt
atggctgaacaagaatcacttgccttatttgatacaccagaagaattatttatgaagggc
acgatgctgtccaccattttttataatgccgaaaacctcttttctgttgtgcgaattctt
gtaaaagaaacgaatgcagactgggatgaaaaagatattattgtgactggtttttttccg
gcacttcatgaacaagaagtttatactttttatggaaaaatgcaagaacatgccaaattt
ggtcaacaattcaaagcagagcgttttaggaaagaaatgccacaatcacgtgcgggctta
attaattatttatcaggagaactttttaaaggtattggtaaagtaacggcagaaaatatt
gtcgatacaattggcgatgatgcgattactcgaatcttatctgatccgagcttattaaat
acggttccaaaactgccatctggtgctgcagagagtttgcttgcttcacttcaagaaaat
caaggtttagaacatgtcatggtgggacttaatgaatatggattcggtccgcaactttct
atgaaaatttttcaagcttataagcaaaatgcgattgaagtgttagaaaataatccttat
aaattaattgaagacgtcaaaggaattggttttcaacgtgcggatgaacttggtcggaaa
cttggcctcggaggaaaccatccagagcggcttcgtgccgggattttatttatgctagat
tcagtttgtatgcagcaagggcatgtttatatggaacaagaagccttacttgcagaagtg
acttatttactggaagagagtgaaggggttcggattgatcaagcgattttaatggaacaa
gtcgagaaactcgctgaagagcaaaaaattatcactgaaaatacacgtgtttatatgccc
tcgctttattattcagaaagtgggtttgcttatcatgtaaaaagaatgcttaaacaaacg
gaataccaagaacaatttcctcagtcggaatttttgctcgcgctcggtgaattagaagag
cgaattggtgttcattacggcgattcccagcgtgaagccttagcacaagcattaatgtca
ccgatgcttgtgctaactggtggtcctggaacagggaaaacgactgttattaaaggaatt
gtggaattatatgcagaattaaatggtgtaagtctcgacccacatgcctataaagatgga
gcgactttcccagtgttattagcagctccaactggaagagcggctaaacggatgtcagaa
tctacagggcttccagcaatgactattcaccgtttgcttggtatgaatgggcaggaacaa
atggatgatgatgcggaaagattaattgatgggcgacttttaattgtggacgaaatgtcg
atggttgatatttggcttgctaatcagctgtttcgtgcattaccagctcatatgcaagtg
gtgttagttggcgaccaagatcagttaccatcagtcggaccagggcaagttttaaaagat
atccttcattcgaaacaaatcccaaccgttgcactttctgatatttatcggcaaaaagat
ggttcttctatcattgaaatggctcataatatcaaagagggaatgctcccagccgatttc
acaaaaaacagtgctgatcggtcgttctttcattgtactgtgaaccaaattggcgatgtc
gtggagcaagttgtaaaaaatgctaaaaataaaggatttcgagcaaaagacatccaagtg
ttagcaccaatgtatcgcggaccagcaggaattgatattttaaataaaaaattgcaagaa
attttcaatcctaatgatactggccgacgaaaagaagtgcaatttggagaattaaaatat
cgtgtccatgacaaagtgttgcaattaattaatcaacctgaaaaaaatgtctttaatggt
gatataggcgaaattatctcgattatttatgccaaagaaaatacggaaaaacaagatatg
attgtggtgcaatttgatcaaacagaagtttcttattaccggcaagaattcaatcaactg
actcatgcatactgttgttccattcataaagctcagggaagtgagtttcctattgtaatt
atgccgattgtacgtagttattaccgaatgcttagacgtgacctgctttatacgggagtc
actcgaagtaaacaatttttgattctttgcggagaagaagaggcgtttcggatgggagtg
gagcgggtcgatgaaaataaacgtaacacgacactttcagaacgtttaactagcgaagat
gtaatgctagaacaaatgacgaacaaacgaatattaacggttgaaaacattatggagatt
gacccaatgattggaatggaaggaataacaccagatcagtttatggcaggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (23)   
   Pfam (23)   
All databases (32)   

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