KEGG T01962: HN6

Lactobacillus salivarius CECT 5713: HN6_00643

Entry

HN6_00643 CDS T01962

Gene name

recD

Definition

Exodeoxyribonuclease V alpha chain (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

lsi Lactobacillus salivarius CECT 5713

Pathway

lsi03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:lsi03440]

SSDB

Motif

Pfam:

AAA_30 AAA_19 UvrD_C_2 HHH_4 AAA_11 Viral_helicase1 UvrD_C UvrD-helicase PhoH UPF0079 AAA_29 AAA_22 T2SE DUF2075 HTH_IclR AAA_12 FtsK_SpoIIIE AAA_28 AAA_16 NTPase_1 AAA AAA_25 DUF258 AAA_17

Other DBs

NCBI-GI:

385840385

NCBI-GeneID:

12472243

UniProt:

D8IKX0

Position

775929..777755

AA seq 608 aa
MAGRIYNNYTNSTLEIIHEDPYRLSVDIDGISFTKADQIAQQFGFASDSPGRIRGAIFQS
LYDLTYATGNTYVELKPLVTETLKLLESNRNEAIDPQLVADQLIKLAEEDKIKSDDNKVY
SRTFFNAEWNIAENLYRLLKSGNSDLPNNDALLDKLLIKAEDQLEIDYDSEQKRAIKDAI
KSPVFLLTGGPGTGKTTIINGIVAVYALLNDIDLDIGKYDKDNPFPILLAAPTGRAAKRM
AESTGLPASTIHRMLGINAHDDKLPEDIQELEGALLIVDETSMVDTLIMDLLLNSIPSHM
QVIFVGDRNQLPSVQPGQVFSDLLVSDTLPKKELTKIYRQGKGSSIINLAHSIKNGELPA
DFTKAQSDRAFIPCEAGQLTSAVEQVIKAALNKGNSKDDIQVLAPMYRGNAGINRLNTIL
QELLNPAKPRQKEVTFNEQIFRIGDRVFHLVNDPENNVFNGDIGKIVGINIPRTKKDKKG
EQIIADFDGNEVTFDKKDWINLTLAYCMSIHKSQGSEFPIVVLAMLPQYQRMFARNLLYT
GITRAKQKLVLLGNVSSFRQSAEIISLNRKTGLLKRIRMEFGVEEKPVEKTDNEEVAVNN
NKEQDLHC

NT seq 1827 nt +upstreamnt +downstreamnt
atggctggaaggatttataataattatacaaatagtaccttggaaataatccatgaagat
ccatacaggttatccgtagatattgacggaattagctttactaaagcagatcaaatagca
cagcaatttggttttgctagtgattcccctggtagaattcgaggagctatttttcaatca
ttatatgatttgacttatgctacaggaaatacttatgttgagttaaaacctttagtaact
gaaacattaaaacttcttgaaagtaatcgcaatgaagcaatcgacccacaattagttgca
gatcagttaattaagcttgctgaagaagataaaattaagtctgatgataataaagtgtac
agtagaacctttttcaatgccgagtggaatatagcagagaatttatatcgactattgaaa
tcgggtaacagtgatttaccaaataatgatgcattattagataaactcttaataaaagct
gaggatcaattggaaatagattatgatagtgaacaaaaaagggcgataaaagatgcaatt
aaatcgccagtttttctgttaacaggtggtccaggtactggtaagacaacaattattaat
gggattgttgcagtatatgccttattaaacgacatagatttagatattggtaagtatgat
aaagataatccatttccaatattgttagctgcaccaacgggacgagctgctaaaagaatg
gcagaatcgacgggattaccagcttctacaattcatagaatgttaggaataaatgcacat
gatgataagttacctgaagatattcaagaacttgaaggtgcattgttaattgtcgatgaa
acatctatggtagatacacttatcatggatttattgttaaatagtattcctagtcatatg
caagttatttttgtgggagatagaaatcagctcccatcagtacaaccagggcaagtattt
tctgatttattagttagtgataccttacctaaaaaagaattaacgaaaatctatagacaa
ggtaaaggttcctcgataattaatttggcacattcaataaagaatggagagctaccagca
gactttactaaagcacaatctgacagagcatttattccatgtgaagctgggcaattaact
tctgctgttgagcaagtgataaaagctgctttgaataagggaaatagtaaagatgatatt
caagtattagctccaatgtatcgtggtaatgcaggaattaataggttaaatactatttta
caagaattattgaatccagctaaacctcgacaaaaagaagttactttcaatgagcaaata
tttagaattggggatagagtttttcatttagtgaatgatcctgaaaataatgtctttaat
ggtgatattgggaagattgtgggaataaatatacctagaactaaaaaagataaaaagggt
gaacagataatagcagatttcgatggaaatgaggtaacttttgataaaaaggattggatt
aatttgacgttggcttattgtatgtccatccataaatcccaaggtagtgagtttccaatt
gtagtgttggcaatgttaccacaatatcaaagaatgtttgctagaaatttgttatataca
ggaataactagagctaagcaaaaattagttcttttagggaatgtttcttcatttagacaa
agtgcagagattatctctctcaatagaaaaactggattattgaaacgtataagaatggaa
ttcggagtagaagaaaaaccagtagaaaaaactgataatgaagaagttgctgttaataat
aacaaagaacaagatcttcattgttga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (24)   
   Pfam (24)   
All databases (33)   

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