KEGG   Lactobacillus salivarius UCC118: LSL_0489Help
Entry
LSL_0489          CDS       T00337                                 

Gene name
nei
Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lsl  Lactobacillus salivarius UCC118
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lsl00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LSL_0489 (nei)
Enzymes [BR:lsl01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LSL_0489 (nei)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LSL_0489 (nei)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
539236..540066
Genome map
AA seq 276 aa AA seqDB search
MPELPEVETVRRGLEKLVLNKKIKDIRVLYSKTIVNEESEFIEKLTNKTIKKIDRRGKYL
LFRFSSDLTMISHLRMEGKYFVEPSTKEVEKHTHVVFDFTDGTSLRYNDVRKFGRMQLVK
TGMEIQTAGLAKLGPEPKEKTFIVEDFSKNLKRRKKAIKNALLDQTIVAGLGNIYADEVL
WMSKIHPETPANKLTEEEVKVLRDNIIKELALATEAGGTTIRSYTDAFRHSGGFQFSLHA
YQRTGDPCERCGTPIQRIVVGQRGTHFCPKCQVVKS
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaagttgaaacagtacgtagaggattagagaaattagtcttaaat
aaaaaaataaaagatattagagtgttgtattcaaaaactatagttaatgaagaatcagaa
ttcatagaaaaattaacaaataaaactattaaaaaaattgatagacgtgggaaatatcta
ttgtttagatttagtagtgatttgacaatgatttcccatttgagaatggaaggaaaatat
ttcgttgaaccaagtacaaaagaagttgaaaaacatacccacgtagtatttgattttaca
gatggaacatcgcttagatataacgatgttagaaagtttggcaggatgcagttggttaaa
acaggaatggaaatacaaactgctggtttagctaaattagggccagaacctaaagagaaa
acatttatagttgaagatttttctaaaaatttgaaaaggagaaaaaaagctataaaaaat
gccttattagatcaaacaatagtggcaggtttgggaaatatttatgcagatgaagtgttg
tggatgagtaaaatccatcctgaaacaccagcaaataaattaactgaagaggaagttaaa
gttttacgagataatattattaaagagttagcgttagctaccgaagctggaggaactaca
attagatcatatacagatgcatttagacattctggaggatttcagtttagcttacatgct
tatcaaagaacaggagatccttgtgagagatgcggaacaccaattcaaagaattgttgta
ggtcagagaggaacacatttttgtcctaagtgtcaggtggtaaaatcatga

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