KEGG T01627: LSA

Lactobacillus sanfranciscensis: LSA_09940

Entry

LSA_09940 CDS T01627

Definition

hypothetical protein

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

lsn Lactobacillus sanfranciscensis

Pathway

lsn03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:lsn03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 AAA_22 DUF2075 UvrD_C DUF258 T2SE AAA AAA_12 AAA_14 Zeta_toxin AAA_16 NTPase_1 AAA_17 PhoH IMS_HHH HHH_5 AAA_28 HHH_8 TrwB_AAD_bind AAA_29 UPF0079 AAA_18 HHH

Other DBs

NCBI-GI:

347534655

NCBI-GeneID:

11150662

UniProt:

G2KUD9

Position

complement(966279..968744)

AA seq 821 aa
MPTSINIFDEPQLNNNQAEKPFVIGKVVTTFFEGADSFYKVLLVKVEKTNTDWTEEEIVV
TGNFADIAEETSYRFVGKLVDHPRYGKQFQADNYERASQSSPEGLIKYLASDDFPGIGKK
TAQKVVETLGTDLIEKIISDPTTIKKVGLNSKQNQTIVDGLRNNNGAEQVIVGLNGYGFG
SALAAAILKKYHEKALKVIQENPYQLVEDIKNISFKRADQIASKVGIEYNSAGRLRAGLL
TTLTRLSIRNGNTYSNSKELINASFEILDTDPQQQIDNQKLAQELKELVKDHKIEVDDGK
IYLKYLYDDEWKIAENAKRIIDDKQSSTKDYKTTIHEVENEAKIKYDDSQIAAINAALEN
QIFILTGGPGTGKTTIINGIVKSFAKVNKLSLDVNKYKDDAFPVLLAAPTGRAAKKMSES
TGIPAATIHRLLGLNGNDEEDGNDIDGQLLIIDEMSMVDTELFTKLMKSIPTGMKVILVG
DKDQLPSVGPGQVFYDLIRSEVIPKIELNQIHRQGDGSTIIQLAHEIKNGEIPQTLLDKE
KDRSFIQCNTSQVVKVIDQVVAKAKERKFTATDIQVLAPMYRGEAGIDRLNNDVQAIMNP
PKGEQQKQVEYQNVKYRIGDKVLQLVNAPEDNVFNGDIGKVVGIEINKDQKKYLDKLVVA
FDQTEVSYTRNDWNQLTLAYCTSIHKAQGSEFNMVILPIVPQYRRMLERNLLYTAVTRAS
QKLIMVGDVNSFAECISHVSSNRKTSLRERLDKIFNPKPVSEKPELVDKKVSTDIESEEP
KKDAEPDKYILTEAKILSNQIDPMVGMDGVKPNDFMDEKLE

NT seq 2466 nt +upstreamnt +downstreamnt
ttgccaacatcaataaacatctttgacgaaccacaattgaataataatcaagcggaaaaa
ccatttgtgattgggaaggtagttactaccttttttgagggtgcagatagtttttataaa
gttttattggtgaaggttgaaaaaactaacactgattggactgaagaggaaattgtggtg
acaggtaattttgcagatattgccgaagaaactagctatcgatttgtgggaaaattggtt
gaccaccctcgttacgggaaacaatttcaagcggacaactatgaacgggcgagtcaaagc
tcacctgagggattgataaagtacttagcgagtgatgattttccgggaattggtaaaaaa
accgcccaaaaagtggttgaaactcttggaacagatttaattgaaaaaataatttcagat
cctacaacgattaaaaaagtcggattaaattccaaacaaaaccaaacgattgttgatggt
ttacggaataataacggtgctgagcaagtgattgttgggttaaatggatacggatttgga
agtgctttagcagctgcaattttaaaaaaataccatgaaaaagccttgaaagtaatccaa
gaaaatccttatcaattggttgaagatatcaaaaatattagttttaaacgagctgatcaa
attgccagtaaagtaggaattgaatataattcagcgggaagattgcgagctggattatta
acgactttaactcggctctcaattagaaacggaaatacttactctaattcaaaggaattg
attaatgctagttttgaaatcctggatactgatccacaacaacagatcgataatcaaaag
ttagctcaagaactaaaagagttagttaaagaccataaaatcgaagttgacgatggaaaa
atttatcttaaatatttatatgatgatgagtggaaaattgcagaaaatgcaaaacggatt
attgatgataagcaaagttctacaaaagattacaaaaccaccattcacgaagttgaaaat
gaagctaaaatcaaatatgatgattctcaaattgccgcaattaacgctgcgctagagaat
caaatttttattttaactggtggaccgggaactggaaaaacgaccatcattaatggaatt
gttaaatcctttgcaaaagttaacaaattatctttagacgttaataaatacaaagatgat
gcatttccggttctattagctgctccaactgggcgagctgccaaaaaaatgagtgaatca
actggtattccggctgctacaattcatcgtttattgggcttgaatggaaatgatgaagaa
gacgggaatgatattgacgggcaattattgattattgatgaaatgtcgatggtcgatacc
gaattatttactaaattaatgaaatcaattccgactggaatgaaggttattttagtcgga
gataaagatcaacttccatcagtgggaccggggcaggttttttatgatttaattcgttcg
gaagtaattcccaaaattgaattaaatcaaattcatcgtcaaggtgatggatcaacaatt
attcaattggctcatgaaattaaaaatggggaaattccccaaactttattagataaagaa
aaagatcgtagttttattcagtgtaatactagccaagttgtaaaagtaattgaccaagtg
gttgccaaagccaaagaaagaaagtttacagcaactgatattcaagtcttagctccgatg
tatcgtggtgaagcaggaattgatcgtttaaataatgacgttcaagcaattatgaaccca
ccaaaaggtgagcagcaaaagcaagttgaatatcaaaacgttaaatatcgaattggggac
aaagtcttacaacttgttaatgcacccgaagataacgtttttaacggcgacattggtaag
gtagttggaattgaaataaataaagatcagaaaaagtatcttgataaattggtagttgcc
tttgaccaaactgaagtttcttacacgagaaatgattggaaccaattgactttagcatac
tgcacttccatccacaaagctcaaggaagtgagttcaatatggtaattttaccgattgtt
cctcaatatcggcggatgctggaaagaaatttgttgtataccgctgttactagagcttct
caaaagttaattatggtcggggatgttaattcctttgctgaatgtatttcacatgtttct
agtaatcgaaagacatctttaagagaacgcttagataaaatttttaatccaaaaccagtt
tcagaaaaaccagaattagtggataaaaaagtttcaactgatattgaatcagaggagccc
aaaaaggatgctgaaccagataagtatattttaactgaagccaaaattctttctaatcaa
attgatccaatggttggaatggatggagtgaaacctaacgattttatggatgaaaagttg
gagtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (28)   
   Pfam (28)   
All databases (37)   

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