KEGG   Candidatus Liberibacter solanacearum: CKC_00380Help
Entry
CKC_00380         CDS       T01373                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lso  Candidatus Liberibacter solanacearum
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lso00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    CKC_00380
Enzymes [BR:lso01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CKC_00380
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CKC_00380
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
78486..79373
Genome map
AA seq 295 aa AA seqDB search
MCPMPELPEVEIIRRNLIPVMKNMILTDIWLHRKNLRFDFPPNFALNVRGKKITNVVRRA
KYLLIELEDNLSIIAHLGMSGSFIIEDTSSTNSQKKIKDPRHNHVTISLSNEDKTQKYRV
IYNDPRRFGFMDLVKTSLRDQYPSLIKIGPEPTDSAFNATYLTHQFYKRNSNLKNALLNQ
RIVAGLGNIYVCEALWRARISPVRTAKSLVQDNKTPNEKISRLIQEIQKVITDAINAGGS
SLRDYVHTDGSIGSFQNSFAVYGKTGKSCPSNCGQMIRRIVQSGRSTFYCTYCQE
NT seq 888 nt NT seq  +upstreamnt  +downstreamnt
atgtgcccaatgcccgaattgccagaagtagaaataattcgacgcaaccttataccggtt
atgaaaaatatgattttaacagatatatggttgcatcgcaaaaatttacgttttgatttt
ccccctaattttgccttgaacgttcgaggtaaaaaaatcactaacgttgtccgacgcgct
aaatatttactcattgaacttgaagataatctatcaattattgcgcacctaggaatgtcc
ggatccttcattattgaggatacttcatcgacaaattctcaaaaaaaaatcaaagaccct
cgccataatcatgtcaccatttctctttcaaatgaggataaaacacaaaaatatcgcgtt
atctataatgatcctcgtcgttttggattcatggacttagtaaaaactagtttacgagat
caatatccctctttaataaaaataggtccagaaccaacagatagtgcatttaatgcaacc
tatttaacccatcaattttataagaggaatagcaatctaaaaaacgctctcttgaatcaa
agaatagtagctggacttggaaatatttatgtgtgtgaagcattatggcgcgctagaatc
tcacccgtacgaacagcaaaaagtctcgtacaagataacaaaacacctaatgaaaagatc
tctagactaatccaagaaattcaaaaagttattactgacgctatcaatgcgggcggatcc
tcattgcgtgattatgtgcacactgatggctcaataggttctttccaaaattcattcgct
gtttacggaaaaacaggaaaatcctgtccatcaaattgcggacaaatgatccgtcgcatc
gtccaatcgggaaggtccaccttctactgtacctattgccaagaatga

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