KEGG   Lysinibacillus sphaericus: Bsph_4110Help
Entry
Bsph_4110         CDS       T00656                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lsp  Lysinibacillus sphaericus
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lsp00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Bsph_4110
Enzymes [BR:lsp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Bsph_4110
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Bsph_4110
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(3979587..3980459)
Genome map
AA seq 290 aa AA seqDB search
MPELPEVEGVVQALKPKVEGRTIQHVQLSERVHFSFSEGKQCIVKQAEPDAFELTLSEMT
ITKIERRAKYIFFHLLKDEVPYVLVSHLGMTGAWFVVNSPEDINEAKFQKHIHATFKMAD
GGYLIYSDIRRFGELRFLAKIEDHIPLTKMAPEPFDELACEFFITKSTLPKYANKAVKEV
IMDGQVISGCGNIYATEALFAQKIHPARKMNRISEKRKRALFEEIVAVLRQSIEAGGSTI
SDYRNINGEAGSMQNRLKMYGKKICPACETATSQMTIGGRTSSFCPNCQH
NT seq 873 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagttaccagaggtagaaggtgtcgtccaggcattgaagccaaaggttgaagga
cgtacaattcaacatgttcagctatctgaaagggtacacttttcttttagtgaggggaaa
caatgtattgttaaacaagcggagcctgatgcatttgaattaacattgtctgaaatgacg
attacaaaaattgaacgacgtgcgaaatatattttctttcatttattgaaagatgaggtt
ccttatgttcttgttagtcacttaggaatgacaggtgcatggtttgttgtaaattcacca
gaagacatcaacgaagccaaattccaaaagcatatacatgcaacatttaagatggctgat
ggtggttacttaatttattcagatatacgacgttttggtgaactacgatttttggcaaaa
attgaagatcatataccattaacaaaaatggcaccagagccctttgatgaattagcgtgt
gaattttttataacaaaatctacattaccgaaatatgcgaataaggccgtaaaagaagtg
attatggatggtcaagtcatttcgggttgtggcaatatttatgcaacggaggcgctattc
gctcagaaaattcatcctgcacgaaaaatgaaccgcataagtgagaagcgcaaacgagca
ttatttgaggagatcgttgctgttttacgtcaaagtattgaagcaggtggttcaactatc
tctgattatcgaaatattaatggggaagctgggagcatgcagaatcgtttgaaaatgtat
gggaaaaaaatatgccccgcctgtgaaacagcaacaagtcaaatgacgattggtgggcgg
acgtcgtctttttgcccaaattgtcaacattaa

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