KEGG   Lysinibacillus sphaericus: Bsph_4310
Entry
Bsph_4310         CDS       T00656                                 
Name
(GenBank) Probable ATP-dependent RNA helicase exp9
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
lsp  Lysinibacillus sphaericus
Pathway
lsp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Bsph_4310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsp03019]
    Bsph_4310
   03009 Ribosome biogenesis [BR:lsp03009]
    Bsph_4310
Enzymes [BR:lsp01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     Bsph_4310
Messenger RNA biogenesis [BR:lsp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Bsph_4310
Ribosome biogenesis [BR:lsp03009]
 Prokaryotic type
  rRNA helicases
   Bsph_4310
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 GRP Helicase_RecD ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: ACA41769
UniProt: B1HYP6
Position
complement(4187515..4189041)
AA seq 508 aa
MTNFSELNISESTLRSVKRMGFEEATPIQEGTIRFAIEGRDVLGQAQTGTGKTAAFGIPL
IEKIDPKNPNIQALVIAPTRELAIQVSEELYKIGYDKRVKLLSVYGGQEIGRQIRALKNR
PQIIVGTPGRIIDHINRRTLKLEDVQTLVLDEADEMLNMGFIDDINAILENVPSERQTLL
FSATMPPAIRKIAETFMRDPEIVKIKAKELTVDNIDQYFVKSAEREKFDVLSRLLNVHQP
ELAIIFGRTKRRVDELAQALSIRGYLAEGIHGDLSQAKRISVLRQFKENKIDILVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKSGLAVTFVTPREMGYLRIVEETTK
KRMTPLRPPTSDEALVGQQRLALDTLEGLIANNNLGDYRTLASEILENHDAIDVVAAALR
SLTKEPDDTPVTISEERPLPMRRERSSSNRGGGDRGRGGNRNYGGRRDSRGGDRRNSSSS
SRREGGRREGGRREGGQGRSRSPRRHED
NT seq 1527 nt   +upstreamnt  +downstreamnt
ttgacaaatttttcagaattaaatattagcgaatctacattacgctctgtaaagcgtatg
ggatttgaagaagcaacaccaatccaagaaggtactattcgttttgcaattgaaggccgc
gatgtattaggtcaagcgcaaacgggtactggtaaaactgccgctttcgggattccacta
attgaaaaaattgacccaaaaaaccctaatatccaagcattggttattgctccaactcgt
gaactagctattcaagtatctgaagagctttacaagattggctatgataaacgtgtgaaa
ttattatcagtttacggtgggcaagaaattggccgtcaaatccgtgcactgaaaaataga
cctcaaatcattgttggtacgccaggacgtattattgaccatattaatcgtcgtacgtta
aaattagaagatgtgcaaacattagtactggatgaagctgatgaaatgttaaatatgggc
tttatcgatgatattaatgccatcctagaaaacgttccttcagagcgtcaaacattactg
ttctcagcaacaatgccgccagcaatccgtaaaattgctgaaacatttatgcgtgatcca
gaaatcgtaaaaattaaagcaaaagaattaactgttgataatattgatcaatatttcgtt
aaatcggctgaacgtgaaaaattcgatgttttatctcgtttattaaatgttcaccaacca
gaacttgctattatctttggtcgtacaaaacgtcgtgtagatgagctagcacaagcttta
tcaattcgtggctaccttgctgaagggattcatggtgatttaagccaagctaagcgaatt
tctgtattgcgtcaatttaaagaaaataaaattgatatccttgttgcaacggatgtagcg
gcacgtggtcttgatatttctggtgtcacacacgtatacaacttcgatattccacaagac
cctgaatcttatgttcaccgtattggtcgtactggtcgtgcaggtaagtcaggtcttgct
gttacgtttgtaacgccacgtgaaatgggttacttacgtatcgtagaagaaactacgaag
aaacgtatgactccacttcgtccgccaacatcagatgaagcattagtaggtcaacaacga
ttagctctagatactcttgagggtcttattgctaataacaacttaggtgattaccgtaca
cttgcgtcagaaatacttgaaaatcatgatgcaattgatgttgtagcagctgctcttcgc
tcattaacaaaagagccagatgatacaccggtaacaatttcagaagaacgtccattacca
atgcgtcgtgaacgctctagcagtaatcgcggcggtggagatcgtggtcgcggtggtaat
cgtaactacggaggacgtcgtgactctcgtggtggagatcgccgtaatagtagtagcagt
agccgtcgtgaaggtggtcgccgtgaaggaggccgtcgtgaaggtggacaaggtcgttct
cgttctcctcgacgccacgaagattaa

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