KEGG   Lactuca sativa (garden lettuce): 111876249
Entry
111876249         CDS       T05352                                 
Name
(RefSeq) uncharacterized protein LOC111876249
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111876249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111876249
Enzymes [BR:lsv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111876249
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111876249
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 zf-ANAPC11 Prok-RING_4 U-box zf-RING_10 Baculo_IE-1 Sina_RING zf-RING_6
Other DBs
NCBI-GeneID: 111876249
NCBI-ProteinID: XP_023728554
Position
1:23362052..23363635
AA seq 233 aa
MSAGFGEVPNRSPQSPSCSNPNNSNNGDPGNFECNICFDLAQDPIVTLCGHLFCWPCLYK
WLHIHSHSQECPVCKALIQEEKLVPLYGRGKNSTDPRSKSVPGVEIPHRPPGQRPETAPP
PDRNAFPQPGFGLMGGFGPAMTASFGNFTFSFGGLIPSFFNVQMHAFTGPQMYGNGGGGG
GAVHGFNYGGNHHHHHHGHGGHQQRGHHHETGFSAASPILIIGLLFLLALLWN
NT seq 702 nt   +upstreamnt  +downstreamnt
atgtctgctgggtttggggaagtgccaaacaggtcaccccaatccccatcttgttcaaac
cctaacaattccaacaatggcgatccaggaaactttgaatgcaacatatgctttgattta
gctcaagatccaatcgtgactttatgtggtcacctcttttgctggccatgcctttacaaa
tggctccacattcattcacattcacaagaatgcccagtttgtaaagccctaattcaagaa
gaaaagttagtacctttatatggaagaggcaaaaactcaacagacccaagatcaaaatca
gttccaggtgtcgagattccacatcggccgccaggtcagcgaccggaaaccgcccctcca
ccagacagaaacgcattccctcaacctgggtttggattaatgggtggttttgggcctgca
atgactgcaagttttgggaattttactttctcatttggtgggttgattccatctttcttt
aatgttcaaatgcatgctttcactggtcctcagatgtatggaaatggtggtggtggtggt
ggagctgttcatggttttaactatggcggcaatcatcatcatcatcatcatggacatgga
ggccatcagcagagaggtcatcaccatgaaacaggtttttctgcagcttcaccaattctg
ataattggtcttctttttctgttggctcttctttggaactga

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