KEGG   Lactuca sativa (garden lettuce): 111893408
Entry
111893408         CDS       T05352                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    111893408
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lsv01009]
    111893408
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111893408
Enzymes [BR:lsv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     111893408
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     111893408
Protein phosphatases and associated proteins [BR:lsv01009]
 HAD phosphatases
  Other HAD phosphatases
   111893408
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     111893408
SSDB
Motif
Pfam: zf-PARP PNK3P Rep_fac-A_C
Other DBs
NCBI-GeneID: 111893408
NCBI-ProteinID: XP_023745239
Position
9:complement(181583004..181587467)
AA seq 585 aa
MLIVADLRISFFSRNPRSVIFALHTMSSPSPTTIVAEYAKSGKSSCKKCSEKIDSKSLRL
GLKSRDPRGYDSLKWHHFNCFFSLDSIPASSAETFEGFSELKGSDQDKLKQMVSEEDRTS
TKREGDVDAESDKRDLKKLKTDEDEESVKEKKNATNEKIVAEYAKSGKSSCKKCTEKIDS
KSLRLGLSIWDPRGFENTKWYHSDCFFPLDVNLLSAESIEGFSELKSDDQEKLKILVTER
DQSSKNLNEDAEPELQGKDQKSGKADKDEESVKEKKNATNEKIVAEYAKSGRSSCKKCSE
KIDSKSLRLGLSIWDPRGYENTKWYHSDCFFPLDVNLLSAESIEGFSQLKSNDQEKLKKL
VSEMDQSSYKTSDKIDEDIGLKIDFSPNDVKDNYKGATLQPKWKVFQTLMYLEREDGLQD
SSKIAAFDFDGCLAKTSVQRVGASAWSLMYASIPNKLQSLYNDGFKLVIFTNESNIERWK
NKRQVAVDSKIGRLNSFIKLANVPIQVFIACGVSKGQEHDPFRKPKTGMWQIMEQHFNSG
IPIDMDKSFYVGDAAGRKDDHSDADKKFAEAIGLKFYLPEKYFDQ
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgcttatagttgctgatcttcgcatttcattcttttcaagaaaccctaggtctgtaata
tttgctcttcatacaatgtcatcgccttcgccaacgacgatcgtcgcggagtacgcgaaa
tcgggtaaatcttcatgcaagaaatgctccgaaaagattgattcgaaatccctgagatta
gggttgaagagtcgagaccctcgagggtatgatagccttaaatggcatcacttcaactgc
ttcttttctttggattccatcccggcttcttcggccgagacgttcgaagggttttctgaa
ctgaagggcagtgatcaagataagttgaagcagatggtgagtgaagaggatcgaacttct
accaagagagaaggagatgttgatgctgagtcagacaaaagagatttaaagaaactaaag
actgatgaagatgaggaaagtgtcaaagagaaaaagaatgcaacaaatgaaaagattgtt
gcagagtatgcgaagtcaggaaaatcttcatgcaagaaatgcactgaaaagatcgattca
aaatctttaagattgggattgagtatttgggacccacgagggtttgaaaacaccaaatgg
tatcactcagactgtttctttcctcttgatgtaaacttgttgtcagcagaatcaattgaa
ggattttcagaactcaagagtgatgatcaagaaaaattgaagatacttgtgacagaaagg
gatcaatcttctaagaatttaaatgaagatgctgaacctgagctgcagggaaaggatcaa
aagagtggaaaggctgataaagatgaggaaagtgtcaaagagaaaaagaatgcaacaaat
gaaaagattgttgcagagtatgcaaagtcaggaagatcttcatgcaaaaaatgctctgaa
aaaatcgattcaaaatctttaagattgggattgagtatatgggacccacgaggctatgaa
aacaccaaatggtatcactcagactgtttcttccctcttgatgtaaacttgttgtctgca
gaatcaatcgaagggttttcacaactcaagagcaatgatcaagaaaaactgaagaaactt
gtgtcagaaatggatcaatcttcttacaagacatctgataaaattgatgaagacattgga
ttgaagatagacttttcacctaatgatgtcaaggacaattacaagggtgcaacattacag
ccaaaatggaaggtgttccagaccctcatgtatctagaacgggaagatggtctccaagat
tcaagtaaaattgctgcctttgattttgatggatgtcttgcaaaaacatcagttcaaaga
gtaggtgcaagtgcttggtctcttatgtacgcttcaatcccaaacaagttacaaagcttg
tacaatgatggtttcaaactggttattttcacaaatgaatcaaatatcgaacgttggaag
aacaagcgacaggtggcagtggactccaagatcggaagactcaacagcttcatcaaactt
gcaaatgtcccaattcaggttttcattgcttgtggtgtaagtaaaggccaagaacatgac
ccctttcgcaagccaaaaactggaatgtggcaaattatggaacaacattttaattctgga
attccaattgatatggataagtcgttttatgttggtgatgctgctggaagaaaagatgat
catagtgatgctgacaagaaatttgcagaggctattgggttgaagttttaccttccagaa
aaatactttgatcaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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