KEGG T05352: 111904051

Lactuca sativa (garden lettuce): 111904051

Entry

111904051         CDS       T05352

Name

(RefSeq) structural maintenance of chromosomes protein 2-1

K06674

structural maintenance of chromosome 2

Organism

lsv Lactuca sativa (garden lettuce)

Brite

KEGG Orthology (KO) [BR:lsv00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lsv03036]
    111904051
Chromosome and associated proteins [BR:lsv03036]
Eukaryotic type
  Chromosome condensation proteins
   Condensin I
    111904051
   Condensin II
    111904051

SSDB

Motif

Pfam:

SMC_N SMC_hinge AAA_21 AAA_23 AAA_15 AAA_29 ERM_helical BST2 ABC_tran

Other DBs

NCBI-GeneID:

111904051

NCBI-ProteinID:

XP_052622011

Position

8:13419415..13425165

AA seq 1175 aa
MHIKEVCLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS
NLQELVYKQGQAGITKATVSVVFDNSDRSRSPLGYEDCPEITVTRQIVVGGRNKYLINGH
LAQPSRVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKDA
ALKTLEKKQGKVDEINKLLDQEILPALEKLRKERMQYMQWSNGNAELDRLKRFCIAYEYV
EAEKIRDNAVHGVEEVKAKITEIDSNTETMQTEIQEMEANVTKLTAEKDATMGGEVKALS
DKVDAISCDLVKETSVLKNQEDNLNTEKKNAVKIEKNLEELKQSVEDRANAVKSAEDGAA
DLKKRVEELKKSLEEHEKEYQGVVAGKSSGNEEKCLEDQLGDAKVAVGKAETELKQLKTK
ISHGEKELKENTTKLLSKRDEAVSVEKELKIRQKDVENVEKALKSLSYEEGQMEGLQKDR
MVESEAVHKIKEEIRMISSRLGNIEFSYRDPVKNFDRSRVKGVVAKLIKVKDSSTMTALE
VCAGGKLFNIVVDTENTGKQLLQNGDLRRRVTIIPLNKIQSHPVPSRVQTAATKLASKGN
AEVALSLVGYDDELQTAMEYVFGATFVCKTSDAAKEVAFNRQVSTPSVTLEGDIFQPSGL
LTGGSRKGGGDLLRQLHALGEAESELSLHQKRLSEIESKINELLPLQKKYNDLKTQLELK
SYDLSLFQTRAEQNEHHKLSETVKRIEQELAEAKSAVNEKQALYKKCVAEVTNLEKSIKD
HSSNRERMLKDLEKKIKDVKKNMQSASKDLKGHENEREKLIMEAEAVKQEQASLENQLVS
FEKQISVLTAEVDALKTKVISLKDEHSEAQRELNAARKKVKECDSQISRILKDQQKLRNK
MGEKNLERKKLENEVKRMEMEQKECSSKVDRLIEKNSWINSEKQLFGRSGSDYDFTSRDP
HKAREHFESLQAEQAGLEKRVNKKVMAMFEKAEDEYNDLISKKNIIENDKSKIKLVIEEL
DEKKKETLKVTWVKVNSDFGSIFSTLLPGTMAKLEPPEGGTFLDGLEVRVAFGGVWKQSL
SELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIV
VSLKEGMFNNANVLFRTKFVDGVSTVQRTVASKKS

NT seq 3528 nt +upstreamnt +downstreamnt
atgcacatcaaagaggtttgtttagagggattcaaatcatacgctacaagaacagttgtt
ccaggtttcgatccctttttcaatgccataaccggattaaacggatccgggaaatcgaac
attctcgattccatttgcttcgtgttaggtatcacgaacttgcagcaggttcgagcttcg
aatttacaggagttggtgtacaagcaaggacaagctggtatcacgaaggcgaccgtgtcg
gttgtgtttgataactccgataggagtagaagcccacttggatacgaagattgccccgaa
attactgttactcgccagattgtggttggtgggaggaacaagtacttgatcaatggacat
cttgcacaaccaagtcgagtgcaaaatctttttcactcagttcagctaaatgtcaacaat
ccacattttctgattatgcaagggcgcattaccaaggtattaaacatgaaacctcctgaa
atattgtccatgcttgaagaagcagctggaacaagaatgtatgaaaccaaaaaagatgct
gctttgaagacccttgagaaaaagcagggtaaagttgatgagatcaacaagcttcttgat
caggaaatactccctgcactagaaaaactaaggaaagagcgaatgcaatacatgcaatgg
tccaatgggaatgcagaattagatagactgaaaaggttttgtattgcttatgaatatgta
gaagcagaaaaaattcgagataatgcagttcatggtgttgaagaggtaaaagccaagata
actgagattgacagtaatacagagacaatgcaaacagaaatacaagaaatggaggcgaat
gtaacaaagttaactgctgaaaaagatgcaaccatgggtggggaggttaaggctctgtca
gataaagttgatgctatttcttgtgatcttgtgaaagaaacttcggttttgaaaaatcaa
gaggacaatctcaacaccgagaaaaagaatgctgtaaagattgaaaaaaatcttgaagaa
ctgaagcagtctgttgaagatagagctaatgctgtaaaaagtgcagaagatggagcagct
gatttgaagaaaagagttgaagagctaaagaagagtttagaagaacatgaaaaagagtac
cagggtgttgttgctggtaaaagcagtggtaatgaagagaagtgtcttgaagatcaatta
ggtgatgctaaagtggcagttggaaaggcagaaaccgagttgaagcagttgaaaacaaag
ataagtcatggtgaaaaggagctaaaagagaacacaactaagttattatcaaagcgggat
gaagctgtttctgtagaaaaagagctcaaaatcagacagaaagatgtagaaaatgttgaa
aaggctttgaaatctttatcatatgaggaaggacagatggaaggtttacaaaaggaccga
atggtggagtcagaagcagtacataagataaaagaggaaataaggatgatttcttcacgt
ttggggaacattgagttctcttatcgtgatcctgtgaagaactttgaccggtcaagagtc
aaaggcgtggttgcaaagcttattaaagtcaaagatagctcaactatgactgcattggag
gtctgtgcaggtgggaagttgtttaatattgtggtggacactgaaaatacaggaaaacaa
cttttacaaaatggtgatctcagaagaagagtgacaattattcctttgaataaaatccaa
agccatcctgtaccttctagagttcaaactgctgctactaaactggcaagtaaaggcaat
gctgaggtggcactttcattggttggttatgatgatgagctccagactgcaatggaatat
gtgtttggtgcaacttttgtttgtaagaccagtgatgctgcaaaagaggttgcatttaat
cgccaagttagtacccctagtgtgacattggaaggtgacatttttcaaccaagtggtctt
ctgactggtggttctcgcaagggtggtggtgatctattaagacaactacatgctttagga
gaggctgaatcagaattatcattacatcaaaaacgactatcagaaatcgaatcaaagatt
aatgagcttcttccacttcaaaaaaagtacaacgacttaaagactcaattagaacttaag
tcatatgatctttcactcttccaaaccagagctgagcagaatgagcatcataagcttagt
gaaacagtaaaaagaatcgagcaagagcttgcagaagctaaatctgctgttaatgaaaag
caagcactttataaaaaatgtgtagctgaagtgacaaatcttgaaaagtcaattaaagac
cattccagtaatcgggaacgtatgctcaaagatttagaaaaaaagattaaggatgtgaaa
aaaaatatgcagtcagcttcaaaggacctcaaggggcatgaaaatgaaagggagaagctt
ataatggaagccgaggcagttaaacaagaacaggcgtctttagagaatcagttagtttct
tttgagaagcagattagtgtgttgactgctgaagtggatgcactgaagaccaaggttatt
tcattgaaagatgaacatagtgaagcacaacgtgagctaaatgcagcccgtaagaaggtg
aaggagtgtgactcacaaatcagtcgtattcttaaagatcagcaaaaacttagaaataaa
atgggtgagaaaaatcttgagaggaaaaagttagaaaatgaggtcaaacgtatggaaatg
gaacagaaagagtgttcatcaaaggttgatagattgattgagaagaattcttggataaat
tctgagaaacaactttttggaagaagtggaagtgattatgatttcacatcccgtgatcca
cataaagcaagggaacattttgaaagtctccaggctgaacaagcagggcttgagaagagg
gtgaacaagaaagttatggccatgtttgagaaagcagaagatgagtacaatgacttgata
tccaagaagaacattattgagaatgacaagtcaaagattaagctggtgattgaagagctt
gatgagaagaaaaaggagacgctgaaagtgacatgggttaaagtgaacagtgattttgga
tctatattttccacgttgttgcctggaacaatggcaaagctagaaccaccagagggaggg
acatttttggatggattagaagtgcgggtggcatttgggggtgtttggaaacagtcatta
tcagaactcagtggtggacaaagatctctacttgcactttctttaattttagcactactt
cttttcaaaccagccccactttatatattggatgaggttgatgcagctcttgatctgagt
catacacagaacatcgggcggatgatcaaagctcactttccacattctcagtttattgtc
gtttccttgaaagaagggatgttcaacaatgcgaatgttctttttcgtacaaaattcgtg
gatggtgtttctactgttcaaagaacagttgcatcaaagaagagttga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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