KEGG   Lactuca sativa (garden lettuce): 111905370
Entry
111905370         CDS       T05352                                 
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6 isoform X1
  KO
K12655  OTU domain-containing protein 5 [EC:3.4.19.12]
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lsv01002]
    111905370
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111905370
Enzymes [BR:lsv01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     111905370
Peptidases and inhibitors [BR:lsv01002]
 Cysteine peptidases
  Family C85
   111905370
Ubiquitin system [BR:lsv04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   OTU
    111905370
SSDB
Motif
Pfam: OTU Peptidase_C65 PKI
Other DBs
NCBI-GeneID: 111905370
NCBI-ProteinID: XP_023756831
Position
6:complement(54723369..54727402)
AA seq 517 aa
MTRVFVQRGSSAAGPSSSSNNTNRSSSSSSSSLPQAQVTGDDVQEQILSEDLPVETVEID
RNDGLDVPTTDKSEDETVSEDLSKRIGGLRVNEEEEEKDVKKSDDYPSQPTSGSPSPHPH
PPPPPAPPTPPPKPSSTGSNSRRFTPGNSAALRIGSSRRATAWPVVSTGSPRSHPENDGY
NSADEQNPCFGSSYDDAVSSSRFTHFKELNNNQTNTERERQFEIDIRRTQGYEVKRMSED
GNCLFRAVADQVYGDSEAYDLARQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGN
NVEIQALSEMYNRPIHIYSYSTEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTI
GAGLGFSCLQGTNVDKDQVKAAIKAQQDQQIDNALMAEARFCSDMELTEKEIEHMVMAAS
RAEYMANDKFKQQLGQTESSTSDAQPSSSGGSITGGPSGSESKGEGTVLCNGMQMVLSMG
FSYVQAMEAYSIFGDDVDSMVCYLLETSSRRKGKATE
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgactcgtgtttttgttcagagaggttcttctgccgctgggccttcttcatcatctaat
aatacaaacaggtcgagttcttcgtcttcatcgagtctacctcaggctcaggttacaggg
gacgacgtccaagaacaaattctttctgaagatcttcctgtagaaactgttgaaattgat
cgaaacgatggtcttgatgtacccactactgataaaagcgaagacgaaactgtttcagaa
gatctttcgaaaagaatcggtggcttgcgagtaaacgaagaggaagaagagaaagatgta
aaaaagtccgatgattatccttcgcaaccaaccagcggaagtccaagtccacatccacat
ccacctccaccacctgctccgcctactccacccccaaaaccatcttcaacaggttctaat
tcccggagatttacgcctggtaattctgccgctttacgaattggttcatctagaagagcc
actgcttggccagttgtttccaccggatctccgaggtctcatcctgaaaacgatggctac
aacagcgctgatgaacaaaacccatgcttcggatcctcatatgatgatgctgtgagttct
agtcgttttactcacttcaaagaactgaataataatcagactaatacggaaagggagcga
cagtttgagattgatattagacgcacacaaggttatgaagtgaaaagaatgtcagaagat
gggaattgtctgtttcgtgctgttgcagatcaagtttatggtgattctgaagcatacgat
ttggctaggcaaatgtgcattgattacatggaacgcgagagagaccacttctcacagttt
ataacagagggtttcacttcttattgcaagagaaagagaagagataaagtctatgggaac
aatgtagagattcaagcattatctgaaatgtacaatcggcctattcatatctactcatat
agcactgagcctataaatatattccatggaagctataacacagatacacctccaatccgg
ctaagttaccatcatggcaaccattacaactctcttgttgatccacgtaggctcacaata
ggtgctggccttgggtttagctgcctgcaagggacaaatgttgataaagatcaagtgaaa
gcagcaatcaaagctcaacaagatcaacagattgataatgctcttatggcagaggcgcgt
ttctgctcagatatggagttgactgagaaggaaatcgagcatatggtgatggctgcatcg
agggctgaatacatggcaaatgataagttcaaacagcaacttggtcaaacagaatcttct
acgtctgatgctcaaccatcctcttctggaggtagtattacaggtgggccatcagggagt
gagagcaaaggcgaaggaacagtgctgtgtaatggaatgcagatggtgctgtcaatgggg
ttcagttatgtgcaggcgatggaggcgtatagtatatttggtgatgacgtggattccatg
gtttgttatcttcttgaaactagcagcaggcgtaaagggaaagcaactgaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (13)   
   RefSeq(nuc) (9)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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