KEGG   Lachancea thermotolerans: KLTH0A01540g
Entry
KLTH0A01540g      CDS       T01117                                 
Name
(RefSeq) KLTH0A01540p
  KO
K10756  replication factor C subunit 3/5
Organism
lth  Lachancea thermotolerans
Pathway
lth03030  DNA replication
lth03410  Base excision repair
lth03420  Nucleotide excision repair
lth03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KLTH0A01540g
   03410 Base excision repair
    KLTH0A01540g
   03420 Nucleotide excision repair
    KLTH0A01540g
   03430 Mismatch repair
    KLTH0A01540g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lth03032]
    KLTH0A01540g
   03036 Chromosome and associated proteins [BR:lth03036]
    KLTH0A01540g
   03400 DNA repair and recombination proteins [BR:lth03400]
    KLTH0A01540g
DNA replication proteins [BR:lth03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    KLTH0A01540g
  DNA Replication Termination Factors
   ELG1-RFC complex
    KLTH0A01540g
Chromosome and associated proteins [BR:lth03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    KLTH0A01540g
DNA repair and recombination proteins [BR:lth03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     KLTH0A01540g
  Check point factors
   HRAD17(Rad24)-RFC complex
    KLTH0A01540g
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_assoc_2 RuvB_N AAA_16 DNA_pol3_delta AAA_14 AAA_22 ResIII DUF815 AAA_24 AAA_18 AAA_11 TIP49 AAA_5 AAA_30 AAA_7 DEAD AAA_3 Viral_helicase1 bpMoxR AAA_19 Mg_chelatase AAA_28 IstB_IS21 AAA_25 TniB nSTAND3 HYPK_UBA RNA_helicase ATPase_2 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 8290322
NCBI-ProteinID: XP_002551529
UniProt: C5DBD0
Position
A:137284..138270
AA seq 328 aa
MNRSAENLPWIEKYRPQTLDDVYGQREIVGTVRKFVKEGRLPHLLFYGPPGTGKTSMIVA
LSREIYGTNYRNMVLELNASDDRGIDVVRNQIKEFASTRQIFSKGFKLIILDEADAMTNA
AQNALRRIIEKYTKNTRFCILANYAHKLTPALLSRCTRFRFQPLPTDAIEKRVNKVLILE
NLKLSREAFTALLRLSKGDMRRALNVLQASKATLDDPDAEVTEDTIYECIGAPHPQDIET
ALESMLKDDWSTAFFTVNKIRTLKGLALIDLVEGIVETLEGYELKPETRVELLCKLSDIE
YAMSKGGNDKVQSSAVIGVVKSSFELEA
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaatagaagcgctgagaacctcccatggattgagaagtacaggccccagaccttggac
gatgtttatggccaaagagagattgttggcacggtccgcaagtttgtgaaggaaggaagg
ctgccacatttattattctacggccctccaggaacgggtaaaacgtcgatgatcgtggcg
ttgtcccgtgaaatttacggaactaactaccggaatatggtccttgagttgaacgcgtcc
gatgatagaggtattgatgttgtgagaaaccagatcaaagaattcgcgtctacacgccaa
atattctccaaaggcttcaagctgattatcctggatgaggcggatgcgatgaccaacgca
gcacagaatgccctgagaagaatcatagaaaagtatacaaagaataccagattctgcatt
ttggccaattacgcacacaagttgacaccagcgctccttagtcgatgcactaggttcagg
ttccagccgcttcctaccgacgctatcgaaaagcgcgtcaacaaggttctcatcttggag
aatctgaaactttctcgcgaagcattcacagccctgctaaggctttccaagggcgatatg
agaagagcgctgaacgttttgcaagcaagcaaggccactttggacgatccagacgccgag
gtcacagaagataccatctacgagtgcataggcgcaccacacccacaagacattgagaca
gcacttgagtcgatgctcaaagacgactggagtactgctttcttcaccgtaaataaaatc
cgcaccctcaaaggtctggctctgatcgacctcgtcgagggtatagttgagaccttggag
gggtatgagttgaagccagagacaagggtagagctgctttgcaagctctcggatattgag
tatgctatgtcgaagggtggtaacgataaagttcaaagcagcgctgtcatcggtgttgtc
aaatctagtttcgaattagaggcgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (34)   
   Pfam (34)   
All databases (50)   

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