KEGG T01117: KLTH0H13420g

Lachancea thermotolerans: KLTH0H13420g

Entry

KLTH0H13420g CDS T01117

Definition

KLTH0H13420p

Orthology

K12585

exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]

Organism

lth Lachancea thermotolerans

Pathway

lth03018

RNA degradation

Module

lth_M00391

Exosome, eukaryotes

Class

Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:lth03018]

SSDB

Motif

Pfam:

RNB PIN_4 OB_RNB

Other DBs

NCBI-GI:

255720322

NCBI-GeneID:

8294800

UniProt:

C5E3G8

Position

H:1172833..1175793

AA seq 986 aa
MAIQRKRLSDGLTVTQKVFVRSRGGGATKIVREHYLRTDIPCLSKACKKCVEIAVPGPDN
ELPKFVLSAEPGELSTVGKHYVVLDANIVLQAIDLLENPTCFTDVIVPQIVLDEVRNRSY
PVYTRLRTLCRDSDDKKRFTVFHNEFSEFTYVERSNDETINDRNDRAIRRTCVWFSEHLK
PYGIHVVLVTNDRLNRELTEKDGIIAKSLLEYVDLLPNADIIKDALPNLEVNRSKDKDVE
AKSEFKFPEYYSTARVMGGIRSGVLYQGSVQISEYNFLEGFVSLPNFSKPVLILGQKNLN
RAFNGDQVVVELLPQGEWKAPSTVAIDSEHFDVNDNADEDEEENVEAEVISDKQRRLLAQ
DAILAQKSSKTQPTARVVSITRRSWRQYVGQIAPTSIDLQTGGTQNAFVILMDKCLPKIR
IRTRRAKELLNKRIVIAVDSWPDTYKYPLGHFVRELGEIESVQAETEALLLEHDVEYRPF
SKKVLDCLPAEGDDWKAPVDLSSPEAIAKDHLLPKRRDLRDKLICSIDPPGCVDIDDALH
AKKLPNGNWEVGVHIADVTHFVKANTPLDAEGASRGTSVYLVDKRIDMLPMLLGTNLCSL
KPYVDRFAFSVLWELDENANIVNVDFTKSVIKSREAFSYEQAQLRIDDESQKDELTQGMR
ALLQLSIKLKQKRLDAGALNLASPEVKVHMDSETSDPGEVEIKKLLATNSLVEEFMLLAN
ISVARRIYEAFPQTAMLRRHAAPPATNFETLNEMLQLRKGMSISLESSKALANSLDRCVD
LEDPYFNTLVRIMSTRCMMAAQYFYAGAYSYPDFRHYGLAVDIYTHFTSPIRRYCDVVAH
RQLAAAIGYEPLDLNHRDKNKMDFMCRNINKKHRNAQFAGRASIEYYVGQVMRNNESVET
GYVIRVFHNGIVVLVPKFGVEGLIRLENLTDDEPSAQFKAEEFKLSFTPKGAEQIKDVYI
FDKVSVQVKSVLDPVTSKRKAQLLLE

NT seq 2961 nt +upstreamnt +downstreamnt
atggctatacagaggaagcgcttatcggacggacttacagttacccagaaagtttttgtt
agatctcgcggcggaggtgccacgaagatagttagagaacactatctgagaaccgatatc
ccatgcctctctaaggcttgcaaaaagtgtgttgaaatcgctgttccgggtcctgataat
gagctaccaaagttcgttctttctgcggaacctggagaactctctactgtcggcaagcat
tacgtggttttagatgctaacatcgtgttacaagctatagatctcctggaaaatcctact
tgctttacagacgtaattgtccctcaaatagtactggatgaagtcagaaataggtcttat
ccagtttatacaaggctgcggactctatgtcgcgatagtgatgacaaaaaaagattcaca
gtattccacaatgaatttagtgagttcacctacgtggagagatccaacgatgaaactatc
aatgacagaaacgacagagcaataaggcgcacctgtgtatggttttctgaacatctgaaa
ccctacggaatacacgttgttttggtcacaaatgaccggcttaacagagagcttacagaa
aaagacggaataatcgccaagagcttacttgagtatgttgatcttttgccaaatgctgac
attatcaaagacgcgcttcccaacctcgaagttaaccggtctaaagacaaagacgtcgag
gcgaaatctgagtttaagtttccagagtattactctactgcaagagttatggggggtatt
agaagtggtgtactttatcaaggatccgtgcaaatctctgaatacaacttcctggaaggt
ttcgtatcgctccctaatttttctaagccagtgcttattttgggccaaaaaaacttgaac
agagcatttaatggcgaccaagtcgtcgtcgaacttctgccgcagggtgagtggaaggcg
ccatcaacggttgccatagactctgagcattttgatgtaaatgacaacgcggatgaagat
gaagaagaaaacgttgaagctgaagtaatatctgataaacagcggcgacttttggctcaa
gatgccattctagctcaaaagtcaagcaaaacacaaccaacagcaagggttgtatcaatc
accaggcgttcttggaggcaatacgttggccaaatagctcctacctcgattgacttgcaa
acaggcggcactcaaaatgcctttgttatcctcatggacaaatgtttgccaaaaatcaga
atccgtactagacgtgcaaaagagcttttgaacaagcgtattgttatagcagtcgactcg
tggccggacacctataagtacccattgggacactttgttagggagctcggagagattgaa
tccgttcaagccgagacggaagctttgctcctggagcatgacgtggaatatagacccttt
tccaaaaaggtgttggactgtctcccagctgaaggtgatgactggaaggcgcccgtggac
ctgtctagtcctgaggctattgcgaaagatcatcttctaccgaaaagacgtgacctccgg
gataagcttatctgcagcattgatcctcccgggtgcgttgatattgacgacgctctacac
gccaagaaactgccgaatggaaattgggaagtgggtgtccacatcgctgatgtaacgcac
tttgttaaggcaaacactcctcttgatgcagaaggtgcttcaagaggcacctctgtttat
ctggtcgataaacgtatagatatgcttccaatgttactgggtactaatctatgctccttg
aagccctatgttgatagatttgcattctctgtcttatgggaattagatgaaaacgccaat
attgtcaacgtcgacttcacaaaatcagttataaaatcaagagaggccttctcctatgag
caagcgcaacttcgcatcgacgatgagtctcaaaaagacgaactaactcagggaatgagg
gcgctgctccagctttcgatcaagcttaaacaaaagcgtttagacgctggcgctttgaac
ctggcctctccagaagttaaggtgcacatggatagtgagacatccgatcctggtgaggtc
gagatcaaaaaattgcttgccacgaattccttggttgaagagttcatgttgcttgcaaac
atctccgttgccaggagaatatacgaggccttcccacaaactgcaatgttgagaaggcat
gctgcacccccagcgacaaattttgaaactttgaacgagatgctgcagctgaggaagggc
atgtctatttccttggaatcgtcgaaagcgctagcaaattccttggataggtgtgttgac
cttgaggatccttatttcaatacactagtccgaattatgtctacacgctgtatgatggca
gctcaatacttttatgcgggcgcatattcgtatcccgacttccgtcattatggtttggct
gttgatatttatactcacttcacatcccccatcagacgttattgtgacgttgttgctcat
cgccagttagctgctgcaattgggtacgagccgttagatcttaatcaccgtgacaagaat
aaaatggatttcatgtgcaggaacattaacaaaaagcatcgtaatgcccagtttgctgga
agagctagcatagagtactacgttggacaggttatgagaaataatgaatctgttgagact
gggtatgttataagggtttttcataatggtattgtggtgctggtacccaaattcggtgtt
gaaggcctcataagattagaaaaccttacagacgacgagccatcagctcaattcaaagct
gaggagttcaagttaagtttcacaccaaagggagccgagcagatcaaagatgtttacatc
tttgacaaagttagtgtccaagtaaaatccgttttagaccctgttaccagtaaacgtaag
gctcaactgctgctggagtag

All links

Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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