KEGG   Urechidicola croceus: LPB138_00400
Entry
LPB138_00400      CDS       T04497                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
lul  Urechidicola croceus
Pathway
lul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LPB138_00400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lul03400]
    LPB138_00400
DNA repair and recombination proteins [BR:lul03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LPB138_00400
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LPB138_00400
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII DEAD UVR AAA_22 AAA_30 Microtub_bd AAA_7 AAA_16 CRS1_YhbY
Other DBs
NCBI-ProteinID: AOW19236
UniProt: A0A1D8P3Y0
Position
complement(75055..77046)
AA seq 663 aa
MEFKLVSEFKPTGDQPEAIKQLTEGILAGEDSQVLLGVTGSGKTFTVANVIQNVDKPTLV
LAHNKTLAAQLYSEFKQFFPENAVEYFVSYYDYYQPEAYIPVTGTYIEKDLSINEDIERM
RLSTSSALLSGRRDVIVVASVSCLYGIGNPVEFKKNVIPITQGQIISRTKFLHTLVQSLY
SRTEVEVSSGTFKVKGDIVTVFPSYGDYAYRIHFFGDEIEDIESFDLENNQVVERFEELT
IYPANLFVTSPDVLQNAIHQIQEDLMKQYDYFKEIGKHLEAKRLKERTEFDLEMIRELGY
CSGIENYSRYLDGREPGTRPFCLLDYFPDDYLMVIDESHVTIPQTHAMYGGDRSRKENLV
EFGFRLPAAMDNRPLKFDEFEAIQNQTIYVSATPADYELQRTEGLFVEQVIRPTGLLDPI
IEVRPSLNQIDDLIEEIQVRVDKDERTLVTTLTKRMAEELTKYLSRIQIRCRYIHSDVDT
LERVEIMQDLRKGLFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTIGRA
ARNVNGKAIMYADKITKSMQLTIDETTRRREKQIAYNTANNITPMQIKKSLENNSLIKTN
ISSFHYDTTANKAAEEELQYLTKGEIEKRIKEKRKSMEEAAKALDFLVAAKMRDEIKVLK
EQL
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggaattcaaactcgtttcagaatttaaaccaacaggtgatcaaccagaagccatcaag
caattaactgaaggtattttggctggagaagacagtcaagtattattgggggttaccggt
tcaggtaaaacatttactgttgccaatgttattcagaatgttgacaaaccaacattagta
ttagcacataacaaaacattggctgcacaattatattctgagttcaaacagttttttcct
gaaaatgctgtagagtatttcgtttcttactatgattattaccaacccgaagcctatatt
ccagtaactggaacttatattgaaaaagatttatctatcaatgaagatatagagcgcatg
cgtttgagcacctcttctgctctactttctggtcgtagagatgtaattgtggttgcatct
gtttcgtgtttatatggtattggaaatcctgttgaattcaagaaaaatgtgattcctata
acacaaggacaaatcatctctcgtacaaaattcctacacactttagtacaaagtttgtat
tctagaactgaagttgaagtaagtagcggaacctttaaagtaaaaggtgatatcgtgacc
gtttttccttcttatggcgattatgcttatagaattcatttctttggagacgaaattgaa
gatattgaaagttttgatcttgaaaacaatcaagtagttgagcgatttgaagaattgacc
atttatcctgccaatttatttgtgacttctcctgatgttttacaaaatgcaattcatcag
attcaagaagatttgatgaaacaatatgattatttcaaagaaataggaaagcatttagaa
gccaaacgattgaaagaacgtaccgaatttgatttagaaatgattcgcgaattgggttac
tgttctggaattgaaaattactctcgttatttggatggacgagaacctggaacacgtcct
ttctgtttactagattattttcctgatgactatttaatggtgattgatgaaagccatgtt
accattccacaaacacacgcaatgtatggcggtgatagaagtagaaaagagaatttagta
gaattcggtttccgattacctgctgcaatggataacagaccattaaaatttgatgaattt
gaagccattcaaaaccagacaatttatgtaagtgccactccagcagattatgagttacaa
cgaactgaaggtctatttgttgagcaagttattcgcccaacaggattattagatccaatt
attgaagtgagaccgagtttgaatcaaatagatgatttaatcgaagaaattcaagttcgt
gttgataaagatgagcgaactttagttacaactttaaccaagagaatggcagaagaattg
accaaatatttaagtcgtattcaaattcgctgtcgctacattcactcagatgttgatacc
ttagaacgtgttgaaatcatgcaagatttacgaaaaggactatttgatgtactaattgga
gtcaatttattacgtgaaggtttagatttgccagaagtttcacttgttgctattttagat
gctgataaagaaggattcttacgtagtcatcgctcattaacccaaacaattggtcgagca
gccagaaatgttaatggtaaagctattatgtatgcagataaaataacgaaaagtatgcaa
cttacaattgacgaaacaactcgacgtcgtgaaaaacaaattgcatataatactgcaaat
aatattaccccaatgcaaattaaaaagtcgttggaaaataattcacttataaaaacaaat
atttcatcttttcactatgatacaactgcaaataaagctgccgaagaagaacttcaatat
ttaactaagggtgaaattgaaaaacgtattaaagaaaaaagaaaatcaatggaagaagct
gcaaaagcattagattttttagttgccgccaaaatgagagatgaaattaaagttttaaaa
gaacaattataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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