KEGG   Luteimonas chenhongjianii: CNR27_11620
Entry
CNR27_11620       CDS       T05077                                 
Name
(GenBank) ribonuclease E/G
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
lum  Luteimonas chenhongjianii
Pathway
lum03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CNR27_11620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lum03019]
    CNR27_11620
   03009 Ribosome biogenesis [BR:lum03009]
    CNR27_11620
Enzymes [BR:lum01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     CNR27_11620
Messenger RNA biogenesis [BR:lum03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CNR27_11620
Ribosome biogenesis [BR:lum03009]
 Prokaryotic type
  rRNA processing factors
   CNR27_11620
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: ATD67994
UniProt: A0A290XFQ2
Position
2554732..2558028
AA seq 1098 aa
MKRMLINATQAEELRVAIVDGQSLYDIDIEQPSREQKKSNIYKGRITRIEPSLEAAFVEY
GAARHGFLPLKEVSRDYFQSGVDPNKGSIKELLREGQEVVVQVDKEERGNKGAALTTFIS
LAGRYMVLMPNSPTAGGVSRRIEGEDRAELKKAMDVLAIPDEMGVIIRTAGVGRDAEELQ
WDLDYLLSIWRAIAEAALSKPSPFLIYQESRLITRALRDYMRADIAEILIDTPEMYAEAR
EFVEQVMPHNLRKLKHYTDDVPLFNRYQIESQIESAYERTVRLPSGGALVIDQTEALTAI
DVNSARATKGGDIEETAFNTNLEAAEEVARQLRLRDLGGLVVIDFIDMSSNKHQRDVENK
LQNALKYDRARVQQNKISKFGLLEMSRQRLRASLGESSQIVCPRCEGHGRMRSIESLSLS
IIRVAEEHAMKDNTGQVLVQAPVEIANYLLNEKRGALAEIEKRHDAPIIIVADEQLQTPH
YEVSRIRENELGEETARPSYQRGTPRRVATIALSKSNLNVPPPAVTNVRPSQPAPVREPR
PEPASPAPVAAPAPAPARPAPAPAAKAPVTGGGFMGWLRALFAPPAPAAKPAAPAQTERP
ARSDAGGQRSDSRGDRGARNGQRRDRRGNRQGQAPAGAESRPTAVAQPPREDVQREIRRE
EAVSTDADAGARKERRQRQKQRGPRQKTEGDVSEAQAPITAVASAAAVELAGKAPAPTGP
VTPTPEAASEAPGVAATPSPAAPRYAVATGDDTDGNDVDGADIDANADAGAGDAGDDDGS
NARRRRGRRGGRRRRRGKAGDGTSGDESSLDADDAGDDEAVVTNGHGQPEFDFDDLPAPP
APAPAPQSNRSEHVGPAAMAAAAVLTPADDAPHSAPQSAGETDVAENPADATTPEAETVE
PASAPIAIEPAQDQPTPDATADAAVETLPDPAQADTPEIADPAAQAVIDVSPTDAPAPVR
EVDRPAAESVSPEMTSNAPPAPAEAEMGASIPDETALAADAPIPSSRIEAEPVPASKPVS
QGLFDAPEPAPEVDRIGDAAAPDAEPAGVTPGDAGLADAPAAEPAALAAEGAEAADEDAT
ADAAGDRQDREAPRPQDA
NT seq 3297 nt   +upstreamnt  +downstreamnt
atgaaacgcatgctgatcaacgcgacgcaggcagaagagctgcgcgtcgccatcgttgat
ggccagtccctgtacgacatcgatatcgaacagccgtccagggaacagaagaagtccaac
atctacaagggccgcatcacccgcatcgagccttcgctcgaggccgcgttcgtcgagtac
ggcgccgcccgccacggcttcctgccgctcaaggaagtctcccgcgactacttccagtcc
ggcgtcgacccgaacaagggctcgatcaaggaactgctgcgcgagggccaggaggtcgtc
gtccaggtcgacaaggaagagcgcggcaacaagggcgcggccctgaccacgttcatctcg
ctggccggccgctacatggtgctgatgccgaactcgccgaccgcgggcggcgtctcgcgc
cggatcgagggcgaggaccgcgccgagctgaagaaggcgatggacgtgctggccatcccg
gacgagatgggcgtgatcatccgcaccgccggcgtcggccgcgacgccgaggaactgcag
tgggatctcgactacctgctgagcatctggcgggcgatcgccgaggccgcgctgagcaag
ccctcgccgttcctgatctaccaggaatcgcggctgatcacccgggccctgcgcgactac
atgcgcgccgacatcgccgagatcctgatcgacacgccggagatgtacgccgaggcgcgc
gagttcgtcgagcaggtgatgccgcacaacctgcgcaagctcaagcactacaccgacgat
gtgccgctgttcaaccgctaccagatcgaatcgcagatcgagagcgcctacgagcgcacc
gtgcggctgccgtccggcggcgcactggtcatcgaccagaccgaggcgctgaccgcgatc
gacgtcaactccgcgcgcgccaccaagggtggcgacatcgaggagaccgcgttcaacacc
aacctggaggcggccgaggaagtggcccgccagctgcgcctgcgcgatctcggcggcctg
gtggtcatcgacttcatcgacatgtcgtcgaacaagcaccagcgggatgtcgagaacaag
ctgcagaacgcgctcaagtacgaccgcgcccgcgtgcagcagaacaagatttccaagttc
ggcctgctggaaatgtcacgccagcgcctgcgcgcgagcctgggcgagtcgagccagatc
gtgtgcccgcgctgcgaaggccatggccgcatgcgcagcatcgaatcgctgtcgctgtcg
atcatccgcgtcgccgaagagcatgcgatgaaggacaacaccggacaggtgctggtgcag
gccccggtggagatcgccaactaccttctcaacgagaagcgcggcgcgctggccgagatc
gagaagcgccacgacgcgccgatcatcatcgtcgccgacgagcagttgcagaccccgcac
tacgaggtttcgcgcattcgcgagaacgaactgggcgaggaaaccgcacgtccgagctac
cagcgtggaacgccgcgccgcgtggcgacgatcgcgctgagcaagagcaacctcaacgtg
ccgcctccggccgtgaccaacgtccgcccctcccagcctgcgccggtgcgtgaaccccgg
cccgagcctgcttccccggctccggtggcggcacctgcccccgcccccgcgcgccctgct
ccggcacctgccgcaaaggcacccgtgaccggcggtggtttcatgggctggctgcgtgcg
ctgttcgcaccaccggcgccagcggccaagcctgcggctccggcccagaccgaacgtccg
gcgcgcagcgatgccggcggccagcgcagcgacagccgcggcgaccgtggcgctcgcaac
ggccagcgccgtgaccgtcgcggcaaccgtcagggacaggcgccagctggcgccgaatcc
cggcctacggccgtcgcgcaaccgccgcgcgaagacgtccagcgtgaaatccgacgcgaa
gaagcggtctccaccgacgccgatgccggcgcccgcaaggagcgccgtcagcgccagaag
caacgcggcccgcgtcagaagacagagggcgatgtcagcgaggcgcaggcgccgatcacg
gccgtcgcgtcggccgccgctgtcgagctcgccggcaaggcgccggctccgaccggcccg
gtaacgcccacgcctgaggccgcatcagaagctccgggcgttgctgcaacgccgtccccc
gccgcgccccggtacgccgtggccactggcgacgacaccgatggcaacgacgtggacggt
gcggacatcgacgccaacgccgatgcaggcgccggcgacgcgggcgacgacgacggcagc
aatgcccgccgccgtcgcggacgtcgcggcggtcgccgccgccgtcgtggcaaggcaggc
gatggcaccagcggcgacgagtcctcgctggatgccgacgacgctggcgacgacgaagcc
gtcgtcacgaatggtcacgggcagccggagttcgacttcgacgacctgccggccccgccc
gcgcctgcgcctgcgccgcagagcaaccgttccgagcacgtcggccctgccgccatggcc
gccgctgcggtgctgacgcccgccgacgacgcaccccactccgccccgcagtccgctggc
gagacggacgtggcggagaaccccgccgatgcgacgacgccagaggccgagacggtcgag
ccggcttctgcgccgatcgcgatcgagccggcgcaggatcagccgacgcccgacgcgacc
gcggacgcggccgtggagacgttgccggatccagcgcaggccgacacgcccgagatcgcc
gatccggcggcccaggccgtgatcgatgtctcgccaaccgacgcacccgcgccggtgcgg
gaagtcgatcggccggcggcggaatcggtgtccccggaaatgacgtcgaacgcccccccc
gcaccggcggaagcggagatgggcgcatcgattcccgatgagactgcgctcgctgcggac
gcgccgatcccgtcgtcacggatcgaggctgagccggtgccggcatcgaagccggtcagc
cagggcctcttcgacgcaccagagccggcgcctgaagtcgaccgcatcggcgacgccgca
gcgcctgatgcagagcccgcaggggtgacgccgggcgatgccggtctggcagatgcgccg
gctgcggagcccgccgcactggccgcggagggtgccgaggctgcggatgaggacgccact
gccgacgccgccggcgatcgccaagaccgcgaggcgccgcgtccgcaggacgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

Download RDF
DBGET integrated database retrieval system