KEGG   Lipotes vexillifer (Yangtze River dolphin): 103074680
Entry
103074680         CDS       T03090                                 
Symbol
SCN8A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 8 subunit alpha
  KO
K04840  voltage-gated sodium channel type VIII alpha
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:lve00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lve04040]
    103074680 (SCN8A)
Ion channels [BR:lve04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   103074680 (SCN8A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc Na_trans_cytopl PKD_channel IQ GPHH Lustrin_cystein Mucin_bdg
Other DBs
NCBI-GeneID: 103074680
NCBI-ProteinID: XP_007452388
UniProt: A0A340WSA1
Position
Unknown
AA seq 1994 aa
MAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
IRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTKGF
DWEEYINNKTNFYTVPGMLEPLLCGNSSDAGQCPEGYQCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGEEGAGSPRSSSEI
SKLSSKSAKERRNRRKKRKQKELSEGEEKGDPEKVFKSESEDGMRRKGFRLPDSRIGRKF
SIMNQSLLSIPGSPFLSRHNSKSSIFSFRGPGRFRDPGSENEFADDEHSTVEESEGRRDS
LFIPIRARERRSSYSGXSGYSQGSRSSRIFPSLRRSVKRNSTVDCNGVVSLIGGPGSHIS
GRLLPEVKIDKAATDDSATTEVEIKKKGPGSLLVSMEQLASYGRKDRINSILSVVTNTLV
EELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLF
MAMEHHPMTPQFEHVLTVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSL
MELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKINQDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVA
WTKLKVHAFMQAHLKQREADEVKPLDELYEKKANCIANHTGADIHRNGDLQKNGNGTTSG
IGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDT
SSSEGSTIDIKPEIEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNIEEGLGKSWWILRK
TCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLL
KWIAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNESSEIRFEIED
VNNKTECEKLMEGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPD
EQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPLNKVQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQ
MENILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFG
MSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPG
SGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFY
EIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILF
AFTKRVLGDSGELDILRQQMEERFVASNPSKMSYEPITTTLRRKQEEVSAVVLQRAYRGH
LARRGFVCKKTTSNKLENGGTHREKKESTPSTASLPSYDSVTKPEKEKQQQQRAEEGRRE
RNRXXXXEVRESKC
NT seq 5985 nt   +upstreamnt  +downstreamnt
atggcagcgcggctgctcgcaccaccaggccctgatagtttcaagcctttcacccctgag
tcactggcaaacattgagaggcgcattgccgagagcaagctcaagaaaccgccaaaggcc
gatggcagtcatcgggaagatgatgaggacagcaagcccaagccaaacagtgacctggaa
gcagggaagagtttgcctttcatctatggggatatcccccaaggcctggttgcggttccc
ctggaggactttgacccatactatttgacgcagaaaacctttgtagtattaaacagaggg
aaaactctcttcagatttagtgccacgcctgccttgtacattttaagtccttttaacctg
ataagaagaatagctattaaaattttgatacattcagtgtttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaaccctcctgaatggtcgaagaat
gtggagtacacgttcacagggatttatacatttgaatcactagtgaaaatcattgcaaga
ggtttctgcatagatggctttacctttttacgggatccgtggaactggttagatttcagt
gtcatcatgatggcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgaga
acattcagggttctgcgagctttgaaaactatctctgtaattccaggcctgaagaccatc
gtgggcgccctaattcagtccgtgaagaagctgtcggatgtgatgatcctgacagtgttc
tgcctgagtgtctttgccttgatcggactgcagctcttcatgggaaacctgcgaaacaag
tgtgtggtgtggcccataaacttcaacgagagctatcttgaaaatggcaccaagggcttt
gactgggaagagtacatcaacaataaaacaaatttttacacagttcctggcatgctggaa
cctttactctgtgggaacagttctgatgctgggcaatgcccagagggataccagtgtatg
aaagcaggaaggaaccccaactatggttacacaagctttgacactttcagctgggccttc
ttggcattgtttcgccttatgacccaggactactgggagaacttgtatcaattaacctta
agagcagctgggaaaacgtacatgatcttctttgtcttggtcatctttgtgggttctttc
tacctggtgaacttgatcttggctgtggtggccatggcttatgaagaacagaatcaggca
acactggaggaagcagagcagaaagaggctgaattcaaagcaatgttggaacaacttaag
aagcaacaggaagaggcacaggcggcggcgatggccacttcggcaggaactgtctcagaa
gatgccatagaggaagaaggtgaggaaggggcaggctctccccggagctcatctgaaatc
tctaagctcagttccaagagtgccaaagagagacgtaacaggagaaagaagaggaaacaa
aaggagctctctgaaggagaagagaaaggagatcccgagaaggtgttcaagtcagagtcc
gaagatggtatgaggaggaagggctttcggctaccagacagcagaattgggaggaaattt
tccatcatgaatcagtcactgctcagcattccgggctccccattcctgtcccgtcacaac
agcaaaagcagcatcttcagcttcaggggccccgggcggttccgggacccgggctccgag
aacgagtttgcggacgacgagcacagcacggtggaggagagcgagggccgccgggactcg
ctcttcatccccatccgagcccgcgagcgccgcagcagctacagcggctaaagtggctac
agccagggcagccgctcctcgcgcatattccccagcctgcggcgcagcgtcaagcgcaac
agcacggtggactgcaacggtgtggtgtccctcatcggcggccccggctcccacatcagc
gggcgtctcctgccagaggtgaaaatagataaggcagctactgatgacagtgctacaact
gaggtggaaattaagaagaaaggccctggatctctcttagtttccatggaacaattggcc
tcctatgggcggaaggacaggatcaacagtatattgagcgttgttacaaatacactggta
gaagagctggaagagtctcagagaaagtgcccgccgtgctggtataaatttgccaacact
ttcctcatctgggagtgtcacccctactggataaagctgaaagagattgtaaacttgatc
gttatggacccttttgtggacttggccatcaccatctgcattgtcctgaatacactgttt
atggcaatggagcaccatcctatgacgccacagtttgaacatgtcttgactgtaggaaat
ctggttttcactggaattttcacagcggaaatgttcctgaagctcatagccatggatccc
tactattatttccaagaaggttggaacatttttgatggatttattgtctccctcagttta
atggaactgagtctagcagacgtggaggggctttcggtgctgcgatctttccgattgctc
cgagtcttcaaactggccaaatcctggcccaccctgaacatgctgatcaagattattgga
aattcagtgggtgccctgggcaacctgaccctggtgctggccattattgttttcatcttt
gccgtggtgggaatgcaactctttggaaagagctacaaagagtgtgtctgcaagatcaac
caggactgtgaactccctcgctggcacatgcatgacttttttcattctttcctcatcgtc
tttcgagtgctgtgcggggagtggatcgagaccatgtgggactgcatggaggtggccggg
caggccatgtgcctcattgtcttcatgatggtcatggttatcggcaacttggtggtgctg
aacctgtttctggccttgctcctgagctccttcagtgctgacaacttggcagccacagat
gatgatggggaaatgaacaacctacaaatctcagttatccggatcaagaagggcgtggct
tggaccaaactgaaagtgcacgccttcatgcaggcccacttgaagcagcgtgaggccgat
gaggtgaaacctctggatgagctgtacgaaaagaaggccaactgtatcgccaaccacact
ggcgccgacatccaccggaacggtgacctccagaagaatggcaatggcacaaccagcggc
attggcagcagcgtggagaaatacatcattgatgaggaccacatgtccttcatcaacaat
cccaacctgaccgtgagggtgcccatcgcggtaggcgagtctgattttgagaacctcaac
accgaggacgttagcagcgagtcggatcctgaaggcagcaaagataaactggatgacacc
agctcctctgaaggcagcaccattgatatcaagccagaaatagaagaagtccctgtggag
cagcctgaggagtacttggatccagatgcctgcttcacagaaggttgtgtccagagattc
aagtgctgccaggtcaacattgaggaagggctgggcaagtcttggtggatcctgcggaaa
acctgctttctcattgtggagcacaattggtttgagaccttcatcatcttcatgattctg
ctcagcagtggcgccctggccttcgaggacatctacattgagcagaggaagaccattcgt
accatcctggagtacgctgacaaagtcttcacctatatcttcatcctggagatgttgctc
aagtggatagcctatggcttcgtcaagttcttcaccaatgcctggtgctggctggacttc
ctcatcgtggctgtctctttagtcagccttatagctaatgccctgggctactcggaacta
ggtgccataaagtcccttaggaccctaagagctttgagacccttaagagccttatcacga
tttgaagggatgagggtggtggtgaatgccttggtgggcgccatcccctccatcatgaat
gtgctgctggtgtgtctcatcttctggctgattttcagcatcatgggagttaacctgttt
gccggaaagtaccactactgctttaatgagtcttctgaaatccgatttgaaattgaagat
gtcaacaataaaacggagtgtgaaaagctcatggagggcaacaatacagaaatcaggtgg
aagaacgtgaaaatcaactttgacaacgtcggggcaggatatctggcgcttcttcaagtg
gcaaccttcaaaggctggatggacatcatgtatgcagctgtagattcccgaaagcctgac
gagcagcctaagtacgaggacaacatctacatgtacatctactttgtcatcttcatcatc
ttcggctccttcttcaccctcaacctgttcatcggtgtcatcattgataacttcaatcaa
caaaagaaaaagtttggaggtcaggacatcttcatgaccgaagagcagaagaaatactac
aatgccatgaaaaagctgggctcgaagaaaccacagaaacccatcccccggcccctgaac
aaagtccaaggtatcgtcttcgattttgtcactcaacaagcctttgacattgttatcatg
atgctcatctgccttaacatggtgacaatgatggtggagacagacactcagagcaagcag
atggagaacattctctactggattaacctggtctttgtcattttcttcacctgtgagtgt
gtgctcaaaatgtttgccttgaggcactactatttcaccattggctggaacatctttgac
ttcgtggtggtcatcctctccattgtgggaatgttcctggctgatataattgagaaatac
tttgtttccccaaccctattccgagtcatccgattggcccgtattgggcgcatcttgcgt
ctgatcaaaggcgccaaagggattcgtaccctgctctttgccttaatgatgtccttgcct
gctctgttcaacatcggccttctgctcttcctggtcatgttcatcttctccatctttggg
atgtccaattttgcatatgtaaagcacgaggctggcattgatgacatgttcaactttgag
acatttggcaacagcatgatctgcctatttcagatcaccacctcggccggttgggatggc
ctgctgctgcccatcctaaaccgcccccccgactgcagtctggacaaggaacacccaggg
agtggctttaaaggagactgcgggaacccctcagtgggcatcttcttctttgtgagctac
atcatcatctccttcctgatcgtggtgaacatgtacattgccatcatcttggagaacttc
agcgtagccacggaggaaagcgcagaccctctgagtgaggatgactttgagaccttctat
gagatctgggagaagttcgaccccgacgccacccagttcatcgagtacagtaagctggca
gactttgcagatgccttggagcatcctctccgagtgcccaagcccaacaccatagagctc
attgccatggatctgccaatggtcagcggggatcgcatccactgcttggacatccttttt
gccttcaccaagcgggtcctgggagacagcggagagttggacatcctccggcagcagatg
gaggagaggttcgtggcatccaatccttccaaaatgtcttacgagccaatcacgaccacg
ctgcggcgcaagcaggaagaggtgtcagcagtggtcctgcagcgcgcctaccgcggacat
ttagcaaggcggggcttcgtttgcaaaaagacaacttccaataagctggagaatggaggc
acccaccgggagaaaaaagagagcaccccgtctacagcctccctcccatcctatgacagt
gtaactaaacccgagaaggagaaacagcaacagcaacgggcagaggaaggaagaagggaa
agaaacagannnnnnnnnnaagaggtcagagaatccaagtgttag

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