KEGG   Lipotes vexillifer (Yangtze River dolphin): 103076607
Entry
103076607         CDS       T03090                                 
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha
  KO
K04842  voltage-gated sodium channel type X alpha
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:lve00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lve04040]
    103076607 (SCN10A)
Ion channels [BR:lve04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   103076607 (SCN10A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc PKD_channel GPHH CcmD_alt Na_trans_cytopl IQ
Other DBs
NCBI-GeneID: 103076607
NCBI-ProteinID: XP_007468214
UniProt: A0A340Y8T8
Position
Unknown
AA seq 1965 aa
MEFPFGSLETTNFHRFTPESLVEIEKQIAAKQEAKKAKEKSKKQKDQEEKTRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITITILVNCVGMTQTELPERMEYVFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYVGEAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVRKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNCTVVNDTANYSSHEKREW
NFCHRDPDFYTNKPGTSDPLLCGNGSDSGHCPEGYFCLKTSDNPDFNYTSFDSFAWAFLS
LFRLMTQDSWERLYQQTLRASGKIYMFFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATI
DEIEAKEKKFQEALQMLRTEQEVLAALGVDTASLHSHSGSPLASKNASVRRHRMKPRVSE
GSTDDNKSPQTESYNEHRMSFLGLTSGRHQASHGSAFHFQAPGRDISFPDGVTDDGVFPG
DCESHRGSLLLGRDASQQGPLPRSPLPHTPSPGLGHGEDGPPTLPTGELAPGAIEVSASD
AGQKTYLTAEYLNEPFRTQRAMSVVSIMTSVLEELEESKQRCPPCLTSLARKYLIWDCCP
TWVKLKTLLFAIVTDPFAELTITLCIVVNTIFMAMEHYGMSPAFEAMLQIGNIVFTVFFT
AEMVFKIIAFDPYYYFQKKWNIFDCIIVTVSLIELGAVRKGSLTVLRTFRLLRVFKLAKS
WPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDNYRDNRRKISAPNEEWPR
WHMHDFFHSFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALL
LNSFSTDNLTAPEDDGEVNNLQVALARIQVLGRRTKKALCSFLNWPFLLPPPKAEPQLVV
KLPLSTSKAENHITADTAAESPGGLLAPRGPRDDHSDFITNPNIWVSVPIAEGESDLDDL
EDDGEEDAQSTQQEVIPQGQQEQLQQVGRYEDHLPPRSSGSGMSSEDLAPYLGEKWKDEA
PAQGPTEGVDDTSSSEGSTVDCLDLGEILRKIPELADDLDEPDDCFTEGCIRHCPCCKVN
SSKFPWAMGWQVRKTCYVIVEHSWFESFIVFMILLSSGALAFEDFYLDQKPTVKALLEYT
DRVFTFIFVFEMLLKWVAYGFKSYFTNAWCWLDFLIVNISLTSLIAKMLQYSDMASIKAL
RTLRALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFQK
CINKTSEGFLLVPWTTVNNMSDCERQNHTGSFFWVNVKVNFDNVAMGYLALLQVATFKGW
MDIMYAAVDSREVNMQPKWEDNVYMYLYFIIFIIFGSFFTLNLFVGVIIDNFNQQKKKLG
GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIIIMVLICLN
MITMMVETDEQSEEKTKILNKINQFFVAVFMGECVMKMFALRHYYFTNGWNVFDLIVVVL
SIGSLVFSAILTSLGNLXXXXLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFN
IGLLLFLVMFIYSIFGMANFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSP
ILNTGPPYCDPNLPNGNGTRGDCGSPIVGILFFTTYIIISFLIVVNMYIAVILENFNVAT
KESTEPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNGNILIQMD
LPLVPGDKIHCLDILFTFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWK
QEDISATVIQKAYRSYVLHRSTTITSAPPVPRAEEEAVSLPDEGFVAFVANENCVLPDKS
ETASATSFPPSYDSVTRGLSDQVNLSTSSSIQNEGEAASKEATGP
NT seq 5898 nt   +upstreamnt  +downstreamnt
atggaattcccctttgggtctctggaaactaccaacttccatcgattcaccccagagtct
ctggtggagattgaaaaacaaattgctgctaagcaggaggcaaagaaagccaaagagaag
tccaagaaacagaaggaccaggaagagaagactcggccccagcttgacttgaaagcatgc
aaccagctgcccaagttctatggcgagctcccagcagagctggtcggggagccactggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttataacc
atcactattttggtcaattgtgtgggcatgacccaaacggaacttccagagagaatggag
tatgtcttcactgtcatttatacctttgaagccttgataaagatactggcaagaggattt
tgtctaaatgagttcacttacctgcgagatccttggaactggctggattttagtgtcatc
accctggcgtatgttggtgaagccatagatctccgagggatctcaggcctgcggacgttc
agagtccttagagctttaaaaacagtgtctgtgatcccagggctgaaggtcatcgtggga
gccctgatccactcggtgaggaagctggcggacgtgaccatcctcaccatcttctgcctg
agtgtctttgccctggtgggcctgcagctcttcaagggcaacctcaagaacaaatgtgtc
aagaattgcacagttgtcaacgatacagccaattactcttctcacgaaaaacgggagtgg
aatttctgtcatagggacccagatttctacaccaacaaaccaggcacttctgatccctta
ctgtgtggcaatggatctgattcaggccactgccctgaaggttatttctgccttaaaaca
tctgacaacccagattttaactataccagctttgactcctttgcttgggcattcctctca
ctgttccgcctcatgacgcaggattcctgggaacgcctctaccagcagaccctgagggct
tctgggaaaatctatatgttttttttcgtgcttgtcatcttcctggggtctttctacctg
gtcaatttgatcttggctgtggtcaccatggcatatgaggagcagaaccaggcaaccatt
gatgaaattgaagccaaggagaagaagttccaggaggcccttcagatgctccggacggag
caggaggtgctggcagccctgggggttgacacagcctctctccactcccacagtggatcc
cctttggcctccaaaaatgccagtgtgagaaggcatagaatgaagccaagggtgtcagag
ggctccacagatgacaacaagtcaccccagactgagtcttacaatgagcacagaatgtct
ttcctaggcctcacctctgggagacaccaggctagccatggcagtgcgttccatttccag
gcccctggccgagacatctcattccctgatggggtcacagatgatggagtctttcctgga
gactgtgaaagccatcggggctctctgctgctgggtagggatgcaagccagcaaggcccc
ctccctaggagtccactgcctcatactcccagccctggcttagggcatggagaagatgga
cccccaacattgcccactggtgagcttgcccctggagccatcgaagtctcggcatctgat
gcaggacagaagacttacttgacagcagaatacttgaatgaacctttccgaacccaaagg
gcaatgagcgttgtcagtatcatgacctctgtcctcgaggaactcgaggagtctaaacag
aggtgcccaccctgcttgaccagcttggctcggaagtatctgatctgggattgctgcccc
acgtgggtgaagcttaagacccttctctttgcgattgtgacggacccctttgcagagctc
acaatcaccctgtgcattgtggtgaacaccatcttcatggccatggagcactacggcatg
agtcccgctttcgaagccatgcttcagattggcaacattgtctttaccgtgttttttacg
gctgaaatggtcttcaaaattatagcgtttgatccctactattacttccagaagaagtgg
aacatctttgattgcatcatcgtcacagtgagcctgatagagctgggtgcggtcaggaag
gggagcctgacggtgctgcggaccttccgcctgctgcgggtcttcaagctggccaagtca
tggccgaccttaaacacgctcatcaagatcatcggcaactcggtgggggctctggggaac
ctcaccatcatcctggccatcattgtcttcgtctttgctctggttggcaagcagctcctc
ggggacaactaccgtgacaaccggcgcaaaatctcagcacccaacgaagaatggccacgc
tggcacatgcacgacttcttccactccttcctcatcgtcttccggatcctctgtggagag
tggattgagaacatgtgggcctgcatggaagtcggccagaagtccatctgcctcatcctt
ttcttgacggttatggtgctgggcaacctggtggtgcttaacctgttcattgccctgctg
ctgaactccttcagcaccgacaacctcacagccccagaggacgacggggaggtgaacaac
ctgcaggtggccctagcgaggatccaggtgttaggccggcgcaccaagaaggccctttgc
agcttcctcaactggcccttcttgctccccccgcccaaggcagagccccagctggtggtg
aaactcccactctccacctccaaagctgagaaccacattactgctgacacggctgcggag
agtcctggagggcttctggctcccagaggccccagggatgaccacagtgacttcatcacc
aatcctaacatatgggtctctgtgcccattgccgagggcgagtctgacctcgatgacttg
gaggatgatggtgaggaggatgctcagagcacccagcaggaagtgatcccccaagggcag
caggagcagctgcaacaagtcgggagatatgaggaccacctgccacccaggagctcaggt
tctggaatgtcctctgaggacctggctccatacctaggtgagaagtggaaagacgaggct
cctgctcagggccctacagagggagtggacgacaccagctcctcagagggcagcactgtg
gactgcctggatcttggggagatcctgaggaagatccctgagctggcggatgacctcgat
gagccagatgactgcttcacagaaggctgcattcgccactgtccctgctgcaaagtgaac
agctccaagtttccatgggccatgggctggcaggtgcgcaagacctgctacgtcattgtg
gagcatagctggttcgagagctttatcgtcttcatgatcctgctcagcagtggagcgctg
gcctttgaagatttttaccttgaccagaagcccacggtgaaggccttgctggagtacacc
gacagggtgttcacgtttatctttgtgtttgagatgctgctcaaatgggtggcctatggc
tttaaaagttacttcaccaatgcctggtgctggctggacttcctcatcgtgaacatctca
ctgacaagccttatagcgaagatgctgcagtattctgatatggcatccatcaaagccctt
cggaccctccgtgccctgcggccactgcgggccctgtctcgatttgaaggcatgcgggtg
gtggtagatgccctggtgggcgccatcccctccatcatgaacgtcctcctcgtctgcctc
atcttctggctcatcttcagcatcatgggtgtgaacctcttcgcagggaagtttcagaaa
tgcatcaacaagaccagtgaaggctttcttcttgtgccttggactactgtgaataacatg
tctgactgtgaacgtcaaaaccacactggaagcttcttttgggtcaatgtgaaggtcaac
tttgataatgttgcaatgggctacctcgcacttctgcaggtggcaacctttaaaggctgg
atggacatcatgtacgcagctgtcgattcccgggaagtgaacatgcagcccaagtgggag
gacaacgtgtacatgtacttgtacttcatcatcttcatcatttttggcagtttcttcaca
ctcaatctcttcgttggggtcatcattgacaacttcaaccaacagaaaaaaaagttaggg
ggccaggacatcttcatgacagaggagcagaagaagtactacaatgccatgaagaaactg
ggctccaagaagccccagaagcccatcccacggcccctgaacaagtaccagggctttgtc
tttgacatcgtgaccaggcaaactttcgacatcatcatcatggtcctcatctgcctcaac
atgatcaccatgatggtggagactgatgagcagagtgaagaaaagacaaaaatcctaaac
aaaatcaaccagttctttgtggccgtcttcatgggcgagtgtgtcatgaagatgttcgcc
ttgaggcattactacttcaccaatggctggaatgtatttgacttaattgtcgtggtcctc
tccattggaagcctggtgttttctgcaattcttacatcacttggaaatttattnnnnnnn
nnnctcttccgagtcatccgcctggcccggatcggccgcatcctcaggctgatccgcggg
gccaagggcatccgcacgctgctcttcgcgctcatgatgtccctgcccgccctcttcaac
attgggctgctgctcttcctggtcatgttcatctactccatcttcggcatggccaacttc
gcctacgtcaagtgggaggctggcattgatgacatgttcaacttccagaccttcgccaac
agcatgctgtgcctcttccagatcaccacgtcggcaggctgggacgggctcctcagcccc
atcctcaacacggggcctccctactgcgaccccaacctgcccaacggcaacggcaccaga
ggggactgcgggagccccatcgtgggcatcctcttcttcaccacctacatcatcatctcc
ttcctcatcgtggtcaacatgtacattgcagtgattctggaaaacttcaatgtggccacg
aaggagagcacggagcccctgagcgaggatgactttgacatgttctacgagacttgggaa
aagttcgacccggaggccacccagttcattaccttctctgccctctcagactttgcagac
acactctctggccccctgcgcatcccaaaacccaatgggaatatattaatccagatggac
ttgcccttggtccctggagataagatccactgtttggacatcctgtttaccttcaccaag
aatgttctgggagaatctggggagttggattctctgaaggcaaatatggaggagaaattt
atggcaactaatctttcaaaagcatcctatgaaccaatagcaaccaccctccggtggaag
caagaagacatttcagccactgtcatccaaaaggcctatcgcagctacgtgctgcaccgc
tccacgacgatcaccagtgccccgcctgtgcccagggctgaggaggaggctgtgtcactc
ccagatgaaggctttgttgcattcgtggcaaatgaaaactgtgtgctcccagacaaatct
gaaactgcctctgccacatctttcccaccatcctacgacagtgtcactagaggccttagt
gatcaagtcaacttaagcacatctagctcgatacaaaacgaaggggaggctgccagtaag
gaagccactgggccctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (31)   

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