KEGG   Lipotes vexillifer (Yangtze River dolphin): 103078625
Entry
103078625         CDS       T03090                                 
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
  KO
K14439  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:lve00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    103078625 (SMARCAD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lve03036]
    103078625 (SMARCAD1)
Chromosome and associated proteins [BR:lve03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    103078625 (SMARCAD1)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD CUE ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 103078625
NCBI-ProteinID: XP_007450084
UniProt: A0A340WSQ2
Position
Unknown
AA seq 1027 aa
MNLFNLDRFRFEKRNKIEEAPEATPQPSLPGPSSPISLSAEEENAEGEVSRAGTPDSDIT
EKTEDSSVPETPENERKASISYFKNQRGIQYIDLSSDSEDVVSPDCSSTVQEKKFSKDTV
IIVSEPSEDEESQGLPTMAGRNNNDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLLK
LIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPFEEDEFNDDQSMKKKRLDQGEES
NESAESSSNWEKQESIVLKLQKEFPNFDKEELREVLKEHEWMYTEALESLKVFAEDQDMQ
YASPSEFPNGKEVSSRSQNYPKNAAKTKLKQKCSMKPQNGFNKKRKKTVFNPKRVIEDSE
YDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELR
PFNSWEALFTKMSKTNGLSEDLIWNCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGN
GGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYL
YQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSRYEEYNV
IVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTP
VQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFI
LRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTEMCNVMMQLR
KMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRH
INNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLR
LDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQA
EDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIATL
LKTSMGL
NT seq 3084 nt   +upstreamnt  +downstreamnt
atgaatcttttcaacctggaccgttttcgctttgagaaaaggaataagattgaggaagcg
cccgaagcaacccctcaaccctccctgcctggcccttcttcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaggcacccctgattcagatataact
gaaaaaacagaagattctagtgttccagaaaccccagaaaatgaaagaaaagcaagtata
tcatatttcaagaatcaaagaggaattcaatatattgatttgtcttcagatagtgaagat
gttgtttccccagattgctccagtacagttcaagagaaaaaattcagcaaagacacagtg
attatagtttctgagccatctgaagatgaagagtcccaaggccttcctaccatggcaggt
agaaataataatgatatttcagaattggaagacctttcggaattggaagaccttaaagat
gctaaacttcagaccttgaaggaactttttccacagagaagtgacagtgatttacttaag
ttaattgaatcaaccagcactatggatggagcaattgctgctgccttgctgatgtttggt
gatgcaggtggtggacctaggaaaagaaaattatcttcttcttcagagccatttgaggaa
gatgaatttaatgatgaccagtctatgaaaaagaagagattggatcaaggagaggagtca
aatgagtctgcagaatctagcagtaattgggaaaaacaggaaagtattgtgttgaaattg
caaaaggaatttcccaattttgataaagaggaattaagggaagtactcaaggaacatgaa
tggatgtacacagaggctttagaatctttaaaagtgtttgcggaagaccaagatatgcaa
tatgcttcaccaagtgagtttccaaatggaaaagaagtttcttcaagaagtcaaaattat
cctaaaaacgcagctaaaacaaaactgaaacagaaatgttccatgaaaccacaaaatggt
tttaacaagaaacgtaaaaaaactgtatttaatcctaaaagagttattgaagactctgaa
tatgattcaggttctgatgtcggtagttcattagacgaggactatagtagtggtgaagag
gtaatggaggatggctataaaggtaaaattcttcacttccttcaagatgcttcaattggt
gaacttactttgattcctcagtgttctcagaaaaaggctcagaagataacagaactccgg
ccctttaatagttgggaagctctgttcacaaagatgtccaaaacgaatggcttatcagaa
gatttgatatggaactgtaaaacactgatccaagaaagggatgtagttataaggcttatg
aacaaatgtgaagacatttcaaataaattgacaaaacaagttaccatgctcactggaaat
ggaggtggatggaacatagaacagccctccattctaaaccaaagtttgtcactcaagccc
tatcagaaggttggtttgaattggctggcattggtacataaacatggacttaatggcatt
ttggcagatgaaatgggcctgggaaaaactattcaagcgattgcattcctagcgtacctc
tatcaggagggtaataaaggtcctcatttgattgttgttccagcatcaactatagataac
tggctaagggaagttaatttatggtgtcccactttaaaggtgctctgttactatggttct
caagaagaacgtaaacagattagatataacattcatagtagatacgaagaatacaatgta
atcgtgaccacgtataattgtgcaatcagcagttctgatgatcgtagtctgtttcgtcgg
ctgaaattgaattacgcaatttttgatgagggccatatgctgaagaatatgggctccatc
cgctaccagcaccttatgacaattaatgcaaataaccgtttgctgctcaccggcacacct
gtgcagaataacctgttagaactcatgtcgctgttgaattttgttatgccgcacatgttc
agtagtagcaccagtgaaatacgaagaatgttttcttctaagacaaaatcagcagatgag
caaagtatatatgaaaaggagagaatagcacatgcaaaacaaattataaaaccatttatt
ctcagaagagtaaaagaagaggttctcaagcagctaccccccaagaaagatcgaattgag
ttgtgtgcgatgtcagagaagcaggagcaactctatttgggtcttttcaacagattgaaa
aaatctatcaataacatggaaaaaaacacagaaatgtgcaatgtcatgatgcaattgaga
aaaatggccaatcatcctttattacatcgccaatattacacagctgaaaaactcaaggaa
atgtctcagcttatgctaaaggaacctacacattgtgaggctaaccctgacctgatcttt
gaagatatggaagttatgacagactttgaattacatgtactttgtaaacagtatcgacac
attaataacttccagttagacatggacttgattttagattctggaaaatttcgagtttta
ggctgcatcttgtctgaattgaaacagaagggtgatagagttgtattatttagccaattt
accatgatgctggatattttagaggttctcttaaaacatcatcagcataggtacctcaga
ttagacgggaagactcagatttctgaaaggattcatctaattgacgagtttaataccgat
atggatatctttgtgtttctgctgtcaacaaaagctggtggcctaggaataaacctgact
tcggcaaatgttgttatacttcacgatattgactgtaacccttacaatgacaaacaagca
gaagatagatgccatagagtaggccagactaaagaagtactagttataaaattaataggc
caagggacaatcgaagaatccatgctaaaaattaatcaacagaaattgaaactagaacaa
gatatgaccacagtagatgaaggtgacgaagggagtatgccagcagatatagccacatta
ctaaaaacatcaatgggcctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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