KEGG   Lipotes vexillifer (Yangtze River dolphin): 103085618
Entry
103085618         CDS       T03090                                 
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
  KO
K17043  ATP-dependent RNA helicase DDX43 [EC:5.6.2.7]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:lve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lve03041]
    103085618 (DDX43)
Enzymes [BR:lve01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103085618 (DDX43)
Spliceosome [BR:lve03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    103085618 (DDX43)
SSDB
Motif
Pfam: DEAD Helicase_C KH_1 MOEP19 ResIII KH_2 P-loop_SecA Phage_integrase KH_5
Other DBs
NCBI-GeneID: 103085618
NCBI-ProteinID: XP_007458469
UniProt: A0A340XGT2
Position
Unknown
AA seq 643 aa
MSRPEAGANASSWVAASQRGAALPRAPERSPEKEPSQGGRGGQKAGGGGGWRGHSGVQQP
VGAGFQEPPLSFSLKNDWVGAVIGRGGSKIKEIQSSTYTKIQIIKGYPEAEVRIFGTKAM
QSKAKTVIDNLVQKQEDYKTEPKVDVAVVQPLDGKDARKDVSGNKKFVDWDKCRENILKW
SKNKWAGLPPIKKNFYVESETTSSMSQDQADNWRKENYNIMCDDLKGGEKRPLPNPIGNF
EDAFHCYPEVMRNLQKAGFQRPTPIQSQAWPIILQGVDLIGVAQTGTGKTLTYLMPGFIH
IDSQPLARNGPGMLILTPTRELALQVEAECRKYSYKGLKSVCIYGGGDRDGQIKDLAKGV
DIIIATPGRLHDLQMNNFVHLKSVTYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMT
SATWPCAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIVTTEDEKQSHIQTFIESLSP
KDKVIIFVSRKAVADHLSSDLSIRHISVESLHGNREQSDRERALKNFRTGEVRVLIATDL
ASRGLDVHDVTHIYNYDFPRNIEEYVHRVGRTGRAGRTGVSVTLITRNDWKIAGELINIL
ERANQSVPEDLVVMAERYKANKLKKEMENKWERPQGKPKMFYY
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgtctcggccggaagccggcgccaacgcctcctcctgggtagctgcttctcagcgaggc
gcggcgctgcctcgggctccggaaaggagcccggagaaggagccgagccaaggcggtcgc
ggaggacagaaggccggcggaggtggcggctggaggggccactccggcgtccagcagccc
gtgggcgctggtttccaggagccgccgctctccttcagcctgaagaacgactgggtgggc
gcggtgatcgggcgtggtgggtcaaaaataaaagagatccagagctcaacatacaccaaa
atacagataataaaagggtaccctgaagcggaagtaagaatttttggcaccaaggcaatg
cagagcaaagcgaaaacagtgatagataatcttgttcaaaaacaagaagactacaaaaca
gaacccaaagttgatgttgctgttgtccaacctttggatggaaaagatgcaaggaaagat
gtttcaggaaataagaaattcgttgattgggataagtgccgagaaaatattttgaaatgg
agcaaaaacaagtgggcaggtttacctccaattaagaaaaacttttacgtggagtcagaa
acaacaagttcaatgtcacaagaccaagcagacaattggaggaaggaaaattataatata
atgtgtgatgacttgaaaggtggtgagaaacgtcctcttcccaaccctattggtaatttt
gaggatgcatttcactgttatcctgaagttatgagaaaccttcaaaaggcaggttttcaa
aggccaacaccaattcagtcacaggcatggccaatcattctacaaggagtagatcttata
ggagtagctcagactggaacggggaagacattgacctacttaatgcctggatttattcat
attgactcacaacctctagccaggaatgggccgggcatgttaatcctcaccccgactcga
gagctagctctgcaagtggaagccgagtgccgtaaatattcatataaaggtcttaaaagt
gtttgtatatatggtggtggcgatagagatggacaaataaaagacttagcgaaaggtgtc
gatatcattattgccactcccggaagactccacgatctacaaatgaataactttgtgcac
ctgaagagcgtaacctacctggtattagatgaagctgacaagatgctggatatgggattt
gaaccccagataatgaagattttattagatgtacgcccagataggcagacagttatgaca
agtgcaacgtggccatgtgctgtccgtagactcgcacaatcttatttgaaagagcccatg
attgtgtatgttggtactttggatctagttgctgtaagtaccgtgaagcaaaatataatt
gtcaccacagaagacgagaaacaatcgcatatccaaactttcatcgagagcctgtctccc
aaagacaaagtcataatatttgttagccggaaagctgtggctgatcatttatcaagtgac
ctgagtatccggcatatatcagtagagtctctgcatggcaacagagaacagagtgatcga
gaaagagcattaaaaaactttagaacaggggaagtgcgagtactgattgctaccgattta
gcatctcgtggtcttgatgtccatgatgtcacacacatctataattacgattttccccgg
aacatcgaagaatatgtgcacagagtagggcgcaccgggagagcagggaggaccggggta
tctgttaccctcatcactagaaatgattggaagattgccggtgaattaattaatattctg
gaaagagcaaatcagagtgtcccagaggatcttgtggtgatggctgagagatataaagca
aataaactgaaaaaagaaatggaaaataaatgggaaagaccccaaggaaaacccaagatg
ttttattattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (33)   

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