KEGG   Yoonia vestfoldensis: LOKVESSMR4R_01935
Entry
LOKVESSMR4R_01935 CDS       T04854                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
lvs  Yoonia vestfoldensis
Pathway
lvs03030  DNA replication
lvs03430  Mismatch repair
lvs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lvs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LOKVESSMR4R_01935 (dnaX)
   03430 Mismatch repair
    LOKVESSMR4R_01935 (dnaX)
   03440 Homologous recombination
    LOKVESSMR4R_01935 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lvs03032]
    LOKVESSMR4R_01935 (dnaX)
   03400 DNA repair and recombination proteins [BR:lvs03400]
    LOKVESSMR4R_01935 (dnaX)
Enzymes [BR:lvs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LOKVESSMR4R_01935 (dnaX)
DNA replication proteins [BR:lvs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LOKVESSMR4R_01935 (dnaX)
DNA repair and recombination proteins [BR:lvs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LOKVESSMR4R_01935 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_16 AAA_22 NACHT NTPase_1 AAA_14 AAA_29 nSTAND3
Other DBs
NCBI-ProteinID: ARU01248
UniProt: A0A1Y0ECM5
Position
complement(1943630..1944736)
AA seq 368 aa
MSDDIIPEPDRLDGAPHPRETPVLYGQQPAEAAFVDAFRAGRMHSGWLITGPRGVGKATL
AWKIATFLLADAPPDMLGEVTLAVPPDHPDARLVQAGAHPRLALIRRPWDDKTGKLRGEI
TVDAVRNLKHFFQMSSADGGRRVVIVDAADEMNRNAANAILKELEEPPAGAVILLVAHQP
SRLLPTIRSRCRELRCGPLTPEDLARALAQAGHSSDNAAGLAALAAGSVGDAIRLLGSGG
MALYADLIRLFGNLPRIDRQAALALAEACSGRGAETRFGLTLDLIDLFLARAARAGLLGA
PATQGAAGEALLLAKIAPDPRAAQAWAQLQQDLSERSRHGRAVNLDPAALILDMIFKIEE
TAQGVAAA
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagcgatgacatcatccccgaacccgaccgtctggacggcgcaccgcatccgcgcgaa
acgccggtgctttatggccagcagcccgccgaagcggcctttgtcgatgcgttccgcgcc
gggcggatgcattcgggctggctgatcaccggcccgcgcggcgtgggcaaggcgacgctg
gcatggaagatcgcgaccttcctgctggccgatgcgccccccgacatgctgggcgaggtg
acgctggccgtgccaccggatcacccggatgcgcggctggtgcaagcgggcgcgcatccg
cgtctggcgctgatccggcggccctgggatgacaagacaggcaagctgcgcggcgaaatc
accgtggatgcggtgcgcaatctgaaacatttcttccagatgtcatctgccgatggcggg
cggcgcgtcgtgatcgtcgatgccgccgacgagatgaaccgcaacgccgccaatgcgatc
ctcaaggaattggaagaaccgcccgcgggggctgtgatcctgctggtggcgcatcaacca
tcaaggctcttgcccacgatccggtcgcgctgccgcgaattgcgctgtggcccgctcacg
cctgaggatctggcgcgcgcgctggcccaggcaggccatagcagcgacaatgcagccggc
cttgccgcgcttgcggctgggtcggtcggtgacgcgatccggctgttgggcagcggtggc
atggcactttacgccgatctgatccggctgttcggtaatctgccccggatcgaccggcag
gccgcgctggccttggccgaggcctgcagcgggcggggggcggaaacccgctttggcctg
acgcttgacctgatcgacctgttcctggcgcgtgcggcgcgtgcgggcttgctgggcgcg
cctgcgacccaaggggcggcgggcgaggctttgctcttggcgaaaatcgcgcccgacccg
cgcgcggcgcaggcctgggcgcagctgcaacaggacctgtccgaaaggtcacgccacggg
cgcgcggtgaaccttgaccctgccgcgctgatccttgatatgatcttcaagatcgaagag
acggcgcaaggcgtcgccgcagcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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