KEGG   Lysinibacillus sp. YS11: LBYS11_16665
Entry
LBYS11_16665      CDS       T05299                                 
Name
(GenBank) endonuclease MutS2
  KO
K07456  DNA mismatch repair protein MutS2
Organism
lys  Lysinibacillus sp. YS11
Pathway
lys03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lys00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    LBYS11_16665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lys03400]
    LBYS11_16665
DNA repair and recombination proteins [BR:lys03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     LBYS11_16665
SSDB
Motif
Pfam: MutS_V Smr MSSS LXG APS_kinase PilJ Gp-FAR-1
Other DBs
NCBI-ProteinID: AUS87866
Position
complement(3326361..3328727)
AA seq 788 aa
MIAERALKTLEYDKVRQQVASYCTSSIGKSAIEELVPQTDFDKVVQLLEEMDEGLSILRV
KGNVPMGGIFDVRPSARRAQIGGMLAAVELMEISSTIRASRILRNFIEDLEADEVIDIPH
FISKKEAMPVLTGLQHEINNCIDDNGAVLDSASQTLRSIRQSLRAEEGKVRSKLESLIRG
SNAAKMLSDTLVTIRNDRFVIPVKQEYRHHYGGIVHDQSSSGQTLFIEPDSVVQANNEIH
RLKMKEQAEIERILLALSAMVQEVASDLFNLVKVLGDIDVILAKGKYGQANKCTMPKMNQ
DGYIRLIRARHPLLPIESAIPNDIEFGKDITAIVITGPNTGGKTVTLKTVGLCTLMAQAG
LPVPALDGSELAVFEQLFADIGDEQSIEQSLSTFSSHMVNIVDILQKFDHESLVLFDELG
AGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVANASVEFDIETLSPT
YRLLIGVPGRSNAFEISSRLGLPESIIDRAKGFTGTDRHEVESMIASLEETRRQSEDDAE
RSHALLLESETLRKELQDKLQAYEERKEALDKKAKEKARKIVDEAKREAEAIIAELREMR
KNADQVVKEHELIEARKRLEEATPLEDNKVLKKAAQVKARAQNLVVGDEVKVLSYGQRGT
LLEKVSNTEWVVQMGILKMKISDSDLEYIKPEKEPVLRTAGVKNRNSHVKLELDLRGERY
EDAIVRTEKYIDDALLSNYGRVSIIHGVGTGALRQGIQSYLKKHKRVKSFRFGEAGEGGL
GVTVVELK
NT seq 2367 nt   +upstreamnt  +downstreamnt
gtgattgctgaacgcgcattgaaaacactagaatacgataaagttaggcaacaagtggct
tcctattgtacttcctccattggtaaatctgccattgaggagcttgtgccacaaacagat
tttgataaagtagtacaattattagaggaaatggatgagggactttccattttgcgtgtg
aagggcaatgtaccaatgggcggaatttttgatgtccgtccctctgccagacgtgctcaa
ataggaggcatgttagcagcagtagaactaatggaaatttcaagcacgattcgagcaagc
cgaattctacgtaattttattgaagatttagaagccgatgaagtgattgatattccccat
ttcatctccaaaaaggaagcaatgcctgtcctaacaggattgcaacatgaaattaataac
tgtattgacgacaatggagctgtcttagattctgctagtcaaacattgcgctctattcgc
caatctttgcgtgctgaagaagggaaagtccgctctaagctggaaagtttaattcgggga
agtaatgcagcgaaaatgctttctgatacacttgtgacaattcgtaatgatcgctttgtt
attcccgtaaagcaggaatatcgtcaccactatggtgggattgtccatgaccaatcttct
tctggtcaaaccttatttattgagccagattctgttgtccaagcaaacaatgaaattcat
cgcttgaaaatgaaagagcaggcagaaattgaacgtattttactagcattaagtgcaatg
gtgcaagaagtagcatcagatttatttaacttagtgaaggtattaggcgatatcgatgtc
attttagcaaagggcaaatatggccaagccaataaatgtacaatgcctaaaatgaatcag
gatggctatatccgactaatacgtgcacgtcatccactactaccaatagaatcagctatt
ccaaatgatattgaatttggtaaagacattacagctattgtcattacaggtcctaataca
ggtggtaaaacggtgacattaaaaacggttggtctgtgtacattaatggcacaagctgga
ttaccagtgccagcattagatggctcagaacttgctgtatttgagcaattatttgccgat
attggtgatgagcaatcaattgagcagtcactttctacgttctcgtcccatatggttaat
attgttgacatcctacaaaaatttgatcacgaatcacttgttctttttgatgagttaggg
gcaggtactgacccacaggaaggggcagccttagccatctcaatcttagacgaagtacat
gggcgcggtgctcgtgtaatggctacaactcactatcctgagctaaaagcttatggctat
aatcgaccaggtgtagccaatgccagtgtagaatttgatattgaaactttgagcccgacc
taccgtctacttatcggtgtacctgggcgctcaaatgcatttgaaatttccagtcgtctt
ggtttacctgaatccattattgatcgtgctaaaggctttactggaaccgatcgacatgag
gttgaatcgatgattgcctcattggaagaaacacgtcgccaatctgaagatgatgcagag
cgttcgcatgcattgctattagaatcagaaacattacgtaaagagcttcaagataaattg
caagcctatgaggagcgtaaagaggcgcttgataagaaggcgaaggaaaaggcgcgtaaa
attgttgatgaagcaaaacgtgaagcagaagcgattattgcagagcttcgagaaatgcgt
aaaaatgctgatcaagttgtcaaggagcatgaattgattgaagcacgtaaacgcttggaa
gaagcaacaccacttgaagacaataaagtgctaaaaaaggcggcacaagtcaaagctcgt
gcacaaaacttagttgtcggagacgaggtaaaggtgttaagctatggtcaacgaggtact
ttgttagaaaaggtgtcgaataccgaatgggttgtccaaatggggattttaaaaatgaaa
atctcagatagtgatttggaatatattaaacctgaaaaagagcctgtattacgaacagct
ggtgtgaaaaatcgaaatagtcatgtgaaactagaattagatttacgtggtgaacgctat
gaggatgcaatcgtaagaacagagaaatatattgatgatgcattactatctaattatggt
cgtgtgtccattattcatggagttggtacaggggctttacgtcaaggtattcaaagctat
ttgaaaaagcataagcgcgtaaaatccttccgttttggtgaagccggtgaagggggctta
ggcgtcacagttgttgaattgaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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