KEGG   Lysinibacillus sp. YS11: LBYS11_20260
Entry
LBYS11_20260      CDS       T05299                                 
Symbol
metH
Name
(GenBank) methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
lys  Lysinibacillus sp. YS11
Pathway
lys00270  Cysteine and methionine metabolism
lys00450  Selenocompound metabolism
lys00670  One carbon pool by folate
lys01100  Metabolic pathways
lys01110  Biosynthesis of secondary metabolites
lys01230  Biosynthesis of amino acids
lys04980  Cobalamin transport and metabolism
Module
lys_M00017  Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:lys00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    LBYS11_20260 (metH)
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    LBYS11_20260 (metH)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    LBYS11_20260 (metH)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    LBYS11_20260 (metH)
Enzymes [BR:lys01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     LBYS11_20260 (metH)
SSDB
Motif
Pfam: S-methyl_trans Met_synt_B12 Pterin_bind B12-binding B12-binding_2 CdhD
Other DBs
NCBI-ProteinID: AUS88478
Position
complement(4038087..4041518)
AA seq 1143 aa
MAKHSIEEQLEKRILILDGAMGTMLQNENLSAEDFGGEELDGCNENLVLTRPDVIEKIHH
KYLEAGADIICTNTFGGTPLVLNEYDLGTKAEVINKRAVEIARQAVDRYSTSDWPRFVAG
AMGPTTKTLSVTGGITFEELEENFYVQAKALIEAGADVLLLETSQDMLNVKAGTLGVKRA
FASTGKELPVMISGTIEPMGTTLAGQTIDAFYISIEHIKPLSVGLNCATGPEFMTDHIRS
LAELSTGYISCYPNAGLPDEEGCYHESPESLSQKLKGFAEKGWLNIVGGCCGTTPAHIAA
IREILKDEKPRQLPEKTHGHAVSGIEPLLYDDSMRPLFIGERTNVIGSRKFKNLIIDGKF
EEAAEIARAQVKNGAHVIDICLANPDRDELADIRGFMQEVVKKVKVPLVIDSTDEKVIEE
ALKFSQGKAIINSINLEDGEERFDAVLPLVKKYGASLVVGTIDEKGMAVDRHRKLEIAER
SYQLLTEKWGIAPEDIIFDPLMFPVGTGDEQYIGSALETIEGIRLIKEKLPQTLTVLGVS
NISFGLPPVGREVLNAVYLYHCTQAGLDYAIVNTEKLERYASIPEEEIKLANDLLFNTND
ETLAVFTDFYRDKKKEKTEADIPKTVEGRLAYYILEGTKEGLIEDLDAAREIFEAPLDII
NGPLMEGMAEVGRLFNDNQLIVAEVLQSAGVMKAAVAHLEQFMEKDEESAGKGKMVLATV
KGDVHDIGKNLVDIILSNNGYKVVDLGIKVTPAQLIEAIRKEKPDFIGLSGLLVKSAQQM
VITAQDFKEAGIDVPILVGGAALSRRFTETKIADEYGGPVIYAKDAMQGLEQANLLMGEG
TREKFLAEIEESRQKRLEADEKRAARPAKEVTIKPARTVKGAPVFLPADLRRHVKKDYSV
SHLYPYVNMRTLLGHHLGLKGQVQQLLDAGDSRATELKDLVDDYLKSDLLKPSGLYQFFP
AQADGDDVVVYDPADSKTEIERFTFPRQQVEPFLCLADFLKTVESGEMDYIALMVVTAGQ
GVMATAHQLKEDGKFLESHALQSTALELAEGFAERMHQEIRDQWGFPDATDFTMRDRFAA
KYQGQRFSFGYPACPNLEDQEKLFGLLKPEDIGVHLTEGFMMEPEASVSAIVFAHPDARY
FNV
NT seq 3432 nt   +upstreamnt  +downstreamnt
atggctaagcactcgattgaagagcaactagagaaacgtattttaattcttgatggcgca
atgggaacaatgctacaaaatgaaaatttatcagcagaggattttggtggcgaggaactt
gatggctgtaatgaaaatcttgtgcttactagaccagatgttattgaaaaaattcaccat
aaatacttagaggcaggcgcagatattatttgtacaaatacatttggtgggacgcctctt
gtgttaaatgaatatgatcttggcacaaaagcagaagtaattaataagcgtgcagtggaa
attgctcgacaagcagtggatcgttattccacatcggattggccacgttttgttgcaggg
gctatggggccaacaacaaaaacgttatcagtaacaggtggtattacatttgaagagcta
gaggaaaatttttatgtacaggcaaaagctttaattgaggcaggagccgacgttttgtta
ttagaaacaagtcaggatatgctcaatgtcaaagcaggcacacttggcgtaaagcgcgct
tttgcatcaacgggaaaagagctacctgtcatgatttcaggaacaatagaaccgatgggt
acaacgcttgcagggcaaacaattgatgccttttatatttcgatcgagcatattaaacca
ttatcagttggcctaaactgtgcgacgggacctgagtttatgacggatcacattcgttca
ttagcagagctttcaacaggctatattagctgttacccaaatgctggcttaccagatgaa
gaagggtgttatcatgaatcaccagaatcgctatcgcaaaaattaaaaggttttgcagaa
aagggttggcttaatattgtaggtggatgttgtgggacgacacccgctcatattgcagcc
attcgtgagatcttaaaagatgaaaaacctcgtcaattaccagaaaaaacacatggtcat
gcggtatcaggaattgaaccgttattgtatgacgattctatgcgtccgttatttattggg
gagagaacaaatgttatcggctctcgtaaatttaagaatttaatcattgatggaaagttt
gaggaggccgcagagattgcacgtgctcaagttaaaaatggtgcacatgttatcgatatt
tgtttagccaaccctgatcgtgatgaattagccgatatacgtggatttatgcaggaggtt
gtaaaaaaggttaaggtgcctcttgtgattgactcaactgatgaaaaagtaattgaggaa
gcattaaagttttctcaagggaaagccatcattaactctattaatctagaggatggtgaa
gaacggtttgatgcagtgttaccactggtgaaaaaatatggtgcatcattagttgttgga
acgatagatgaaaagggaatggcggttgaccgtcatcgaaagcttgaaattgccgaacgc
tcctatcaacttttaacggagaaatggggaattgcaccagaggatatcattttcgaccca
ttaatgttccctgtaggaacgggcgatgagcagtatattggttcagctttggaaacgatt
gaaggcattcgactcatcaaagaaaaattgccgcagacattgacggtacttggcgtaagt
aatatttcatttggcttaccaccagttggccgtgaagtactgaatgctgtctacctctat
cattgtacacaggcaggcttagattatgccattgttaatacagagaaattggagcgttac
gcatccataccggaagaggaaattaaactcgcaaatgacctgctctttaatacaaatgat
gaaacattagcagtgtttacagatttttatcgtgataaaaagaaggaaaaaacggaagcc
gatattccgaaaacggttgaaggtcgtttagcttactatatattagaaggaactaaagaa
gggctaattgaggatttagacgctgcacgggaaatcttcgaggcgccgcttgatataatt
aatggtcctttaatggagggcatggctgaggtaggtagattatttaatgataatcaactc
attgtagcagaggttttacaatcagcaggggtgatgaaggccgctgttgctcatttagag
caattcatggagaaggatgaagagagtgctgggaaagggaaaatggtccttgctacggta
aaaggtgatgttcacgatattgggaaaaaccttgttgatattatattaagtaataatggc
tataaggttgtcgatttgggcattaaagtaacccctgcccaattgattgaagcaattcgt
aaggaaaaaccagattttattgggctgtcaggtttactcgtgaaatcagcgcaacagatg
gtaattactgctcaggattttaaagaggcgggaattgatgtacctattttagttggtgga
gctgcactttctcgtcgttttactgaaacaaaaattgcagatgaatatggcggtcctgtt
atttatgcaaaggatgctatgcaaggcttagagcaagcgaatctattaatgggtgaaggg
acacgtgaaaaattcttagcagaaattgaagaatcccgtcaaaaacgtttagaggccgat
gaaaaacgagctgctcgtcctgcaaaagaggtaacaataaagcccgcacgaacagtaaag
ggagcgcctgtatttttaccagctgatttacgacgtcatgtgaaaaaagactattctgta
tcgcatttatatccttatgttaatatgcgtactttattgggacaccatttaggcttgaaa
gggcaggttcagcaattgcttgatgcgggtgattcaagagcaacagagctaaaggattta
gtagatgattatttgaaaagtgatctattaaagccatcaggtttgtatcaatttttccct
gctcaagcagatggtgatgatgtcgttgtgtatgatccagctgatagtaagacggaaatt
gaacgttttaccttccctcgtcagcaggtggaaccatttttatgtcttgcagatttctta
aaaacggtagagagcggtgaaatggactatattgcgcttatggttgtaacagcaggtcaa
ggagtaatggctacagctcaccagttaaaagaggatgggaaattccttgaaagtcatgcc
ttgcaatctactgctttagaattagcagagggctttgctgaacgtatgcatcaggaaatt
cgtgaccaatggggcttccctgatgcaacagatttcactatgagagatcgttttgctgca
aaatatcaggggcaacgcttttcattcggatatcctgcatgtcctaacttggaggatcaa
gaaaaactattcggcttgttaaaacctgaggatattggcgtccatcttacagaaggcttt
atgatggagccagaagcatctgtatctgcaatcgtttttgctcatcctgatgctcgctac
ttcaatgtttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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