KEGG T00657: MAB

Mycobacterium abscessus ATCC 19977: MAB_0279c

Entry

MAB_0279c CDS T00657

Gene name

ligC

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mab Mycobacterium abscessus ATCC 19977

Pathway

mab03410	Base excision repair
mab03420	Nucleotide excision repair
mab03430	Mismatch repair
mab03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mab03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mab03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mab03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mab03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C

Other DBs

NCBI-GI:

169627384

NCBI-GeneID:

5962822

Position

complement(278241..279272)

AA seq 343 aa
MLAKPVAKIPDGASYEPKWDGFRSIVFRDGDEVELGSRNEKPLTRYFPELVAAVLAELPP
RCVVDGEIVIATEAGLDFEALQQRIHPADSRVRLLAEQTPSSFIAFDLLALGDEDYTGRP
FSERRAALTEALSSAGTSIHLTPATTDQALAQRWFEEFEGAGTDGLIAKPLAIAYQPDKR
VMFKIKPERTADCVVAGYRVHKSGDDAIGSLLLGLYQEDGILASVGVIGAFPMAERKRLF
QELQPLIIPLENHPWNWAAHEAGERTPQKNAGSRWNAGKDLSFVPLRPERVVEVRYDHME
GVRFRHTAQFNRWRPDRDPRSCTYEQLEQPITFSLNDIVPGLV

NT seq 1032 nt +upstreamnt +downstreamnt
atgcttgccaaacctgtcgcaaaaatccctgacggcgcctcctacgaacccaagtgggat
ggattcaggtcgatcgtctttcgcgacggcgacgaggtggagctgggtagccgcaatgag
aagccactgacccggtacttccccgagttggtagcggcggtgctcgccgaactaccgcca
cggtgtgtcgtcgacggtgagatcgtgatcgccaccgaggcgggtctggatttcgaggcg
ctgcaacaacggatccacccggcggattcgcgggtacggctgttggccgagcagacaccc
tcctccttcatcgcattcgacctgctcgccttgggcgacgaggactacaccgggcggccc
ttcagcgagcgccgtgccgcgctgacggaagcgctctcgagtgccgggacctcgatacat
ctgacccccgccaccacagatcaggcactggcgcagcgctggttcgaggaattcgagggc
gccggtaccgacggtctcatcgccaaaccgttggccatcgcctaccaacccgacaaacga
gtgatgttcaagatcaagccggagcgaaccgccgattgcgtggtcgcgggctaccgagtg
cacaaatcgggtgacgatgccatcggctcgctgctgctgggcctgtaccaggaggacggc
atattggcgtcggtcggtgtgatcggcgcgttccccatggccgaacgcaagcgcctattc
caagaactgcaaccgttgatcatcccgctcgaaaatcacccgtggaactgggccgcacac
gaagccggcgagcgcactccgcagaagaacgccggctcccgctggaacgcgggcaaggat
ctttcgtttgtcccgctgcgtcccgagcgagtggtggaggttcgctacgaccacatggag
ggtgtgcggttccgtcataccgcgcagttcaaccgctggcgcccggatcgcgacccgcga
tcctgcacctacgagcagctagaacaaccaattacattcagcctcaacgatatcgttcca
ggtctggtgtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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