KEGG T00657: MAB

Mycobacteroides abscessus ATCC 19977: MAB_1607

Entry

MAB_1607          CDS       T00657

Name

(GenBank) Possible ribonuclease E Rne

K08300

ribonuclease E [EC:3.1.26.12]

Organism

mab Mycobacteroides abscessus ATCC 19977

Pathway

mab03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:mab00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MAB_1607
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mab03019]
    MAB_1607
   03009 Ribosome biogenesis [BR:mab03009]
    MAB_1607
Enzymes [BR:mab01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     MAB_1607
Messenger RNA biogenesis [BR:mab03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MAB_1607
Ribosome biogenesis [BR:mab03009]
Prokaryotic type
  rRNA processing factors
   MAB_1607

SSDB

Motif

Pfam:

RNase_E_G IF2_N S1 PCB_OB

Other DBs

NCBI-ProteinID:

CAM61692

UniProt:

B1MMY0

Position

1637570..1640449

AA seq 959 aa
MADYELPEDLHTSAPEGEHAALTPDTPPAPAEQGELPEKLRVHSLARVLGTSTRRVLDAL
SNLDGRARSPHSNVDKQDAAKVREVLANEAEAAPVVAETPAPVAAEEAPAVVTGDSADSA
EDPDNPPTTPILIAEATVIEAAAVPVPAAAAPTAYDYGPLFVAPQAPEPQERPAPVRTEK
AEDVDEDAGETDDSDADGEGDGDRPARRRRRGRRGRGRGRGEQGGGEGSDDSGDDAAAEG
GEAAEGDDAADGTGDDSPAPDGDESNAEDGDTPEGASRRRRRRRRRKAGSGDDGDGPSDD
DPPNTVVHERKPRAERGDEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILTEAEFLARRE
AVDRVMVVRDKTRSEPPHEGARYTQIAVLEDGVLVEHFVTSAASASLVGNIYLGVVQNVL
PSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGSNRKIEQALKSGDYVLVQVSKDPVGHKG
ARLTTQISLAGRYLVYVPGASSTGISRKLPDTERQRLKEILRDIVPADAGVIIRTASEGV
REEDIRADVQRLQEQWQGIEQSATDLTSKASGAAVALYEEPDVLVKVVRDLFNEDFSKLI
IEGDAAWDTIDDYVKTVAPDLLSRIERYESGEGPDVFAVHRIDEQLAKALDRKVWLPSGG
TLVIDRTEAMTVVDVNTGKFTGAGGNLEETVTRNNLEAAEEIVRQLRLRDVGGIVVIDFI
DMVLESNRDLVLRRLTEALGRDRTRHQVSEVTSLGLVQLTRKKLGTGLIEAFSSTCTHCA
GRGIVLHVDPVDNASNASSPAKKAETGRRAKRSRKGKTDDVVVARTPSHPQGEHPMFKAM
AAANGHHEDDEDADVNEDALDDDALEEVEEVEEIVETIQSAETPDNVPDQDEPEHEPASA
GSNAASEPWAEGAPEAAATEPGTAEPEAPAATPEPAAAAPTRPRRRRSAARAAGPPVEH

NT seq 2880 nt +upstreamnt +downstreamnt
gtggccgactatgagctaccagaagacctacacaccagcgctccagaaggggaacacgcc
gcgctaacgccggacaccccgcctgccccagctgagcagggagaacttcccgagaagctg
agggtgcattccctggcgcgcgttctgggaacctcgacacgccgcgtgctcgacgcgctg
tccaacctggacgggcgcgcccgcagcccgcactccaatgtcgacaagcaggacgcggcc
aaggtgcgtgaggtgcttgccaatgaggcggaggcggctcccgtagtcgccgagacaccg
gccccggtggctgccgaggaagcgcccgccgtcgtcaccggcgactcggccgattcggca
gaagaccccgacaacccgccgaccacgcccatcctcatcgccgaggcgacggtcatcgag
gccgccgcggtgccggtgccggcagccgctgctcctaccgcatacgactacgggccactg
ttcgtggccccacaggctcccgagccccaggaacggcccgcgcccgtccgtaccgagaag
gccgaggacgtcgacgaggacgccggtgagacggacgattccgacgccgatggggagggc
gatggcgatcgtccggcacgtcgccggcggcggggacgccgtggccgtggccgtggacgc
ggcgaacagggcggtggcgaaggctccgacgactccggtgacgatgcggcagccgagggt
ggcgaggccgccgagggcgatgacgccgccgacggtaccggggacgattcgccggcgccc
gacggtgacgaatcgaatgccgaggacggtgacactcccgagggtgccagtcgccgccgg
cgccggagacgtcgtcgcaaggccggaagcggtgacgacggggatggcccgtcggatgac
gatccgccgaacaccgttgtgcacgagcgcaagccgcgtgccgagcggggcgacgagatt
caggggatttccggttccacccgcctggaggccaagcgccagcgccgccgcgacggccgc
gacgccggacggcgccggcccccgatcctgaccgaggccgagttcctggcccggcgcgag
gccgtcgaccgggtgatggtggtgcgggacaagacccgttccgagcccccgcacgagggc
gcccgctatacgcagatcgctgttctcgaggacggtgtgctcgtcgagcacttcgtgacg
tcggcggcctccgcgtcgctggtgggcaacatctacctcggcgttgtacagaacgtgctg
ccgtccatggaggcggcattcgtcgacatcggccgcggccgcaacggtgtgttgtacgcc
ggtgaggtcaattgggacgccgccggtctcggcggctccaaccgcaagatcgagcaggcc
ctcaaatccggtgactacgtgctggttcaggtcagcaaggacccggtgggacacaagggc
gcacggctcaccacccagatctcgctggcgggccgctacctcgtgtacgtgccaggtgcg
tcgtcaaccggcatcagccgcaagttgcccgataccgaacgtcagcgcctcaaggagatc
ctgcgggacatcgtgccggcggacgccggtgtcatcatccgcaccgcctcggaaggtgtg
cgggaagaggacatacgcgccgatgtgcagcggttgcaggaacagtggcagggcatcgaa
cagagtgccacggacctcacctccaaagcgtccggcgctgccgtggcgctgtatgaagaa
cccgacgtgctggtcaaggtggttcgtgacctgttcaacgaggacttctccaagctcatc
atcgagggtgacgccgcgtgggacaccatcgatgactatgtgaaaacggttgcccccgat
cttctttcgaggattgagcggtacgagagtggtgagggtccggacgtgttcgcggtgcac
cgcatcgacgagcagctggccaaggcactggatcgcaaggtgtggctgccctcgggggga
accctcgtgatcgatcgcaccgaggcaatgacggttgtcgacgtcaacaccgggaagttc
accggagccggcggcaacctggaagaaaccgtcacccgcaataacctggaagctgccgag
gagatcgtgcggcaattgcgtctgcgcgacgtcggcggcatcgtggtcatcgatttcatc
gacatggtgctcgaatccaaccgcgacttggtgctgcggcgtctcaccgaggcgctgggc
cgcgaccgcacccgtcaccaggtgtccgaggtgacgtcgctgggattggtgcagctgact
cgcaagaagctgggtaccgggttgatcgaggcgttctcgtccacctgcacgcactgcgcg
ggcaggggaatcgtgctgcacgtcgaccccgtcgacaatgcgagcaacgcgtcctccccg
gccaagaaggccgaaaccggacgccgggccaaacggtcccgcaagggtaagaccgacgat
gtggtggttgcacgcacaccctcgcacccccagggcgagcatccgatgttcaaggcgatg
gcggcggccaatggccaccacgaagatgatgaagacgcggacgtgaacgaggatgcgctg
gacgacgacgcgctcgaggaggtcgaggaggtcgaggagattgtcgagaccatccagagc
gccgagacgccagacaacgtaccggaccaggacgaacccgagcacgagccggcgtcggcg
ggcagcaatgccgcgtcggagccgtgggccgaaggtgcacccgaggccgctgccaccgag
cccgggacggcagagcccgaggctccggcagcgacgcccgagcccgctgccgcggcgccc
accaggccccggcgcaggcgttcagcggcccgtgccgcggggcctccggtagagcactag

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF

DBGET integrated database retrieval system