KEGG T03694: MMASJCM

Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300: MMASJCM_2257

Entry

MMASJCM_2257      CDS       T03694

Name

(GenBank) excinuclease ABC subunit B

K03702

excinuclease ABC subunit B

Organism

mabl Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300

Pathway

mabl03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:mabl00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MMASJCM_2257
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mabl03400]
    MMASJCM_2257
DNA repair and recombination proteins [BR:mabl03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MMASJCM_2257
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MMASJCM_2257

SSDB

Motif

Pfam:

UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_22 AAA_16 AAA_5 AAA_19 DUF87 UB2H Helicase_RecD UPF0730 UvrD-helicase HEM4 AAA_7 AIG1

Other DBs

NCBI-ProteinID:

BAP97033

Position

2276651..2278810

AA seq 719 aa
MAFATEHPIVAHSEYRPVTDILRTEGRFEVVSQYEPAGDQPGAIAELERRVRAGEKDVVL
LGATGTGKSATTAWLIERLQRPTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQ
PEAYIAQTDTYIEKDSSINDDVERLRHSATSNLLSRRDVVVVASVSCIYGLGTPQSYLDR
SVQLDVGLEVPRDALLRLLVDMQYNRNDMAFTRGTFRVRGDTVEIIPSYEELAVRIEFFG
DEVEALYYLHPLTGDVVRQTNSLRIFPATHYVAGPERMGKALEGIEQELEERLSELEGQG
KLLEAQRLRMRTNYDIEMMRNVGFCSGIENYSRHIDGRGAGTPPATLLDYFPDDFLLVID
ESHVTVPQIGAMYEGDMSRKRNLVDFGFRLPSAVDNRPLTWEEFADRIGQTVYLSATPGN
YERSAAGGEFVEQVIRPTGLVDPKVVVKPTKGQIDDLIASIRQRTEADERVLVTTLTKKM
AEDLTDYLLEMGIRVRYLHSEVDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSSRSLIQTIGRAARNVSGEVHMYADTMTDSMKEAIEETDRRRAKQIAY
NQANGIDPQPLRKKIADILDQVYREAEDTEEVAVGGSGRNSSRGRRAQGEPGRAVSAGVF
EGRDTKSMPRAELADLIKDMTEQMMTAARDLQFELAARFRDEIADLKKELRGMDAAGLK

NT seq 2160 nt +upstreamnt +downstreamnt
atggctttcgcaacagaacaccccatcgttgcgcattccgagtatcgcccggtcacggat
atcttgcgtaccgaggggcggttcgaggtcgtcagtcagtacgaacccgccggcgaccag
cccggtgctatcgccgagctcgaacgcagggtccgtgcgggggagaaggacgtggtactc
ctcggtgccaccggtaccggtaagtcggccacgacggcctggctcatcgagcgcttgcaa
cggccgacgctcgtcatggcacccaacaagaccctcgcggcacagttggccaacgagctc
cgggaaatgttgccgcacaacgccgtcgagtacttcgtttcgtactatgactactaccag
ccggaagcgtatatcgcgcaaaccgatacctacatcgaaaaagacagctccatcaacgat
gacgtggaacgtctgcggcactcggcgacatccaacttgctgtcccgccgggatgtcgtg
gtggtggcctcggtctcatgcatctacggattgggtactccgcagtcgtacctggatcgt
tcggtgcagttggacgtggggctggaggtgcctcgcgatgcgctgctgcggctgctggtc
gacatgcagtacaaccgcaatgacatggccttcacccgcggcaccttccgggtacgcgga
gacaccgtcgagatcatcccgtcctacgaagagctggccgttcgcatcgaattcttcggt
gacgaggtagaggcactctattatctgcatccgctcacgggagacgttgtgcggcagact
aattcgctgagaatttttcccgccacccattacgtggccgggccggagcgcatgggaaag
gcgttggagggtatcgagcaggagctcgaggagcgtctgtccgaattggaggggcaaggc
aagctgctggaggcgcagcgcctgcggatgcggaccaactacgacatcgagatgatgcgc
aatgtcggcttctgctcgggtatcgaaaactattcgcggcatatcgacggacgtggcgcc
ggtacgccgcccgccaccttgctggactacttcccggatgatttcctgctggtcatcgat
gaatctcacgtgaccgttccgcagatcggtgccatgtatgagggcgacatgtcgcgtaaa
cggaacctggtggacttcggtttccggctcccatccgccgtcgacaatcgtcctctcacc
tgggaagagttcgccgaccgtatcggccagacggtgtatctgtccgcgacccccggcaac
tatgagcgcagtgcggcaggcggcgagttcgtggaacaggtcatccggccgaccgggctg
gtggatcccaaggtggtggtcaaacccaccaaggggcagatcgacgatctcatcgcatcg
atccggcagcgcaccgaggccgacgaacgcgtgctggtgaccacgctgacgaaaaagatg
gcggaggacctcaccgactaccttctggaaatgggtatccgggtgcgttatctgcactcc
gaggtggacacgctgcggcgagtcgagctgttgcgccagctcaggcttggcgagtacgac
gtcctggtgggtatcaacctgctgcgggaaggccttgacctacccgaagtgtcgttggtt
gcgattctggacgccgacaaggaagggttcttgcggtccagtagaagcctgatccagacc
atcggtcgtgccgcgcgcaacgtctccggtgaggtgcacatgtatgccgacaccatgacc
gactccatgaaggaggcgatcgaggagacggatcgtcgacgtgccaagcagatcgcctat
aaccaggccaatggaatcgacccacaacccttgcgcaagaagatcgccgacatcctcgac
caggtgtaccgggaggccgaggacaccgaggaagtggcggtcggtggatccggtcgtaac
tccagccggggccggcgggctcagggcgagcccggtcgcgcggtcagcgccggggtcttc
gaaggtcgtgacaccaagagcatgccgcgtgcggagctggccgatctgatcaaggacatg
accgaacagatgatgacggcggcacgcgatctgcagttcgagttggcggcccgattccgc
gacgagatcgccgatctcaaaaaggaattgcgcggcatggatgccgcaggcttgaagtag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (25)   

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