KEGG   Methanosarcina acetivorans: MA_2510
Entry
MA_2510           CDS       T00080                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase, type I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mac  Methanosarcina acetivorans
Brite
KEGG Orthology (KO) [BR:mac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mac03032]
    MA_2510 (topA)
   03400 DNA repair and recombination proteins [BR:mac03400]
    MA_2510 (topA)
Enzymes [BR:mac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     MA_2510 (topA)
DNA replication proteins [BR:mac03032]
 Prokaryotic type
  DNA Topoisomerases
   MA_2510 (topA)
DNA repair and recombination proteins [BR:mac03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MA_2510 (topA)
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim HHH_5 Cdd1 DUF4332 DNA_pol_lambd_f IMS_HHH RAD51D_N DUF2283
Other DBs
NCBI-ProteinID: AAM05896
UniProt: Q8TMY4
Position
3114624..3116882
AA seq 752 aa
MHLIVTEKNIAARRIAAILAPKSPKKERVSGVDVYRYELGKGKSRQETAVVGLSGHIVGI
DFQKEYNNWQKVDARALIDAEITTTPINRKIVTALRTLGKEADRVTIATDYDREGELIGV
EALNIIKKVNPEVPFDRVRYSAITPKAIDAAFTNPTSVDFDLADAGHSRQVIDLVWGAAL
TRYISLAAGRLGKMFLSVGRVQSPTLSLVVDREKERNIFVPTPYWEIHVELETKAGETFS
AQHSTRRFLDKEEATAVFKKLGKKAELKEIEKGTKSDLPPTPFNTTGFISAANSIGLSPA
NAMRIAESLYTNGYISYPRTDNTVYPETLDLRAQIEIFTEGPFKEFADALLEKAELVPTR
GKKETTDHPPIYPASLAKESELKEEEWKVYELVVRRFFATFAGPSTWETMRLRLEINAEE
FRANGARLLEPGWRWYYPYNVPEDRLFPELSEGEILKVIKKEMLDKETQPPGRYGQGRLI
NIMEELGLGTKATRHEIISKLYSRAYIHGNPVQPTNTSFAVVETLEKYSPTITKPDMTKL
LEENMDLIAEGKIKEDTVLEESREMLQQVFSELDKNRDKIIESLQAGLREDKIIGNCSLC
GNELMIRRSKRGSRFIGCSNYPNCTFSLPLPKSGQIVVTDKQCETHGLHHIRIINAGKRP
WDLGCPQCNFIEWQKTQKEKQAQQPKKEKPKTIKDIEGVGKATAGKLEEAGITSVEALAE
ADPIELAKTIKTSVKKVKTWQISCNGGIVEDL
NT seq 2259 nt   +upstreamnt  +downstreamnt
atgcaccttatcgtaacggaaaaaaatatagcagcaaggaggatagctgcgattctggct
ccaaaaagtcctaagaaggaaagagtcagcggagtagacgtataccggtacgagcttgga
aaaggcaaaagcaggcaggagactgcagtagtagggctttccgggcatattgtcgggata
gattttcaaaaagagtacaacaactggcagaaggttgatgccagagccctgatcgacgct
gagattacgacgactccaatcaaccggaagatagtgaccgctttaaggacccttggaaaa
gaagcagatagggtcacaattgcaactgactacgaccgggaaggggaactgataggagtc
gaagctctgaatatcataaagaaggtgaacccggaggtaccttttgacagggtccgctac
agtgcaatcaccccaaaagcaattgatgcagcatttacaaaccctacaagtgttgatttt
gaccttgccgatgcaggccactccaggcaggttattgacctggtctggggagctgccctt
acccgatatatttcccttgcagcaggcaggctcgggaaaatgttcctatccgttggaagg
gtgcaatccccaaccttatcacttgtagtcgacagggaaaaagagagaaatatttttgtt
cctactccttactgggaaatccacgtcgaacttgaaacaaaagcaggtgagactttttca
gcccagcactcaacccgccgtttcctggacaaagaggaagctacagcggtctttaagaaa
ctgggaaaaaaagccgaattaaaagagatagaaaagggcacaaaaagtgacctgcccccg
accccatttaatactacaggctttatcagcgcggcaaactcaatcgggctcagccctgca
aacgccatgcgtatagccgaatccctctacactaacgggtatatatcttatcccaggacc
gacaatacggtttatcccgaaacccttgacctcagggctcaaattgaaatctttacggaa
gggccttttaaggagttcgcagacgccctgcttgagaaagccgaacttgttcccacccgc
gggaaaaaagaaacaacagaccacccccctatctatccggcgtcccttgcaaaggaatcc
gagttaaaagaagaggaatggaaggtctacgagcttgtggtcaggcgcttttttgcaacc
ttcgcaggacccagcacctgggagaccatgcgcctgagactcgaaatcaatgccgaagag
ttcagggcaaacggagcaagattgctggaaccgggatggcgctggtattacccttacaat
gtccctgaagacaggctgtttccggaactcagcgaaggagaaatccttaaagtcataaaa
aaagagatgctggacaaagaaacccagccacccggccgttacgggcagggcaggctgatc
aacataatggaagagctgggtcttggcacaaaagctacccgccatgagattatcagcaag
ctctattccagggcatatatccacggaaacccggtacagcccacaaatacctcttttgcc
gtggtggaaactcttgaaaaatactcgcctacgatcacaaaaccggacatgacaaagctg
cttgaagaaaatatggacctgatcgcagaaggcaaaattaaagaggacactgtccttgaa
gagtccagagaaatgctccagcaggtattttcggaactcgacaaaaacagggacaaaatc
atagagtccctgcaggcaggtctcagggaagacaagatcataggcaactgctccttatgc
ggaaacgaactcatgatccgccgctcgaaaagaggaagccgctttataggctgcagcaat
taccctaactgtaccttctccctccccctaccaaagagcggccagatcgtggttacagac
aagcaatgcgagacacacggcctgcaccacatccgcataattaatgccggaaaacgcccc
tgggacctcggctgcccccagtgcaactttatcgaatggcaaaaaacccagaaagaaaag
caggcccagcagccgaaaaaagaaaagcccaagacaattaaagacatcgaaggcgtggga
aaagccactgcaggaaaactggaagaagcagggatcacaagcgtggaagccctggcagaa
gccgatcccatagaactcgcaaaaacaataaagaccagcgtaaaaaaggtcaaaacctgg
cagatctcatgtaacggcggcatagttgaggacctataa

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