KEGG T01649: MEALZ

Methylomicrobium alcaliphilum: MEALZ_3867

Entry

MEALZ_3867 CDS T01649

Gene name

ligA

Definition

DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mah Methylomicrobium alcaliphilum

Pathway

mah03410	Base excision repair
mah03420	Nucleotide excision repair
mah03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mah03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mah03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mah03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M

Other DBs

NCBI-GI:

357407181

NCBI-GeneID:

11363750

UniProt:

G4SZS2

Position

complement(4456953..4457804)

AA seq 283 aa
MNKANRFNLVRLLLIPIFLFVASAAAIEKPDIMQAKVFDPSIDVTEYWVSEKLDGVRARW
DGKQLISKNGHLLHAPNWFIEDFPDVTLDGELWLARGQYQQTVSIVSRKAPHSGWEKIKL
MVFDLPDNPKPFSERVAAMRQMAQQRHTPYLNFIKQFRVVSPDELKQKLDQVVAEGGEGL
MLHHQDSLYQHGRSNRLLKLKPYDDAEAVVIGYRPGKGQFAGKMGSLKVRTENGKEFYIG
TGFSQREREAPPPLGSLISFRHQGYTDKGIPRFAVFIRIRDEP

NT seq 852 nt +upstreamnt +downstreamnt
atgaacaaagctaatcgattcaacttagtccgcctgctgcttatcccgatatttctgttt
gttgcaagcgccgcggccattgaaaaaccggacatcatgcaggccaaagttttcgatccg
tcgatcgatgtcacggaatattgggtcagcgaaaagcttgatggggtccgggcgcgctgg
gacggaaaacaactgatttctaaaaacggccacctgcttcatgcgccaaactggttcatc
gaagactttcccgatgtaacgctggatggcgaactatggttggcaagaggtcaatatcag
cagaccgtttcaatcgtcagtcgcaaggctcctcattccggctgggagaaaataaaattg
atggtcttcgacctgcctgacaacccgaaacccttttcagaacgggtcgccgcaatgcgt
caaatggcacagcaacggcatacgccgtatctgaatttcatcaagcaattccgagtcgta
tcccccgacgaattaaaacagaaactggatcaagtcgtggccgaaggcggcgaaggcctc
atgctgcatcatcaagacagtctttaccagcatggccgcagcaatcggttgcttaaatta
aaaccttacgacgatgcggaagcggtcgtgatcggttatcgacccggcaaaggacaattt
gccggcaagatgggctctcttaaagtccgaaccgaaaacgggaaggaattttacatcggc
accgggttcagccagcgggaaagagaagccccgccgcctctgggcagtcttattagcttt
cgtcatcaaggctacaccgataagggcattccccgttttgccgtattcatcagaatacgc
gatgaaccttga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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