KEGG   Mesorhizobium amorphae: A6B35_04925
Entry
A6B35_04925       CDS       T04446                                 
Name
(GenBank) double-strand break repair helicase AddA
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
mamo  Mesorhizobium amorphae
Brite
KEGG Orthology (KO) [BR:mamo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mamo03400]
    A6B35_04925
Enzymes [BR:mamo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A6B35_04925
DNA repair and recombination proteins [BR:mamo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     A6B35_04925
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 DEAD Exo5
Other DBs
NCBI-ProteinID: ANT49326
UniProt: G6Y771
Position
complement(1022131..1025649)
AA seq 1172 aa
MKKAYPIPSDTASSQARASDPLNSAWVSANAGSGKTHVLAQRVIRLLLRGTDPSKILCLT
YTRAAAANMSNRVFSTLSEWTALGDTELAARIEALDGRRADRDTMRRARRLFAEALETPG
GLKIQTIHAFCESVLHQFPLEANIPAHFEMLDPQMEASLFATARRDMISGTTAGEAGLAG
AFATVLERGGEAGLDALLAEIVHKRDGLRAFIGALGRDGPGFQPLFDEFRFRAGETAEGI
ATSVWPLPGFLPDYFVGFAQTAEATDARAVLNNLLPYARAAFAEKDPIRRLQMLGKAFLK
ADGDPYDPQKAFKKALLDRLPDLPERYLAAVNAIIEVSDRLALFRMLEGTCAALTIAGWL
IARYEQLKRGRGFLDFNDLITRTVSLLARPDAGPWVQYKLDQGIDHILLDEAQDTSPDQW
EVVKRLTEEFFAGLGQRETVQRTMFAVGDEKQSIYSFQGAAPDSFADSRHLFAGRVRDAD
ASFADLKLTWSFRSTDDVLAAVDRVFAEPGVRRGISHDPDPLSHKAIRTDAPGYVEVWPS
IGADAVEEPDDWTLPVNHASAPAVRVAEHVAATIQAWLRDGETIEGQGRKLTAGDILVLV
RKRDRFVHALSRSLKNRQIPVAGADRLSLPGHIAVKDLIALGHFLIQPEDDLSLAAVLRS
PIFDVSEEQLFALASGRPSGQSLIGSLRLHADQDAALAAIVSRLDAWADEAAFKPVFEFY
AAALARDGLRKRMIARLGPEAGDIIDEFLSFCLAEERTGLPGLEAFLATLESTGPEIKRE
MDQTRDEVRVMTVHAAKGLEAPVVFLVDGGSAPFSDQHLPRLMPFQGSGEHFVGKGYLWR
SASDVANGFSKTAAARARDLADDEYRRLLYVGMTRAEDRLIACGYCGKRAPSTGTWHSIV
SRALVGAPESTERKHPATGEPVHRFHMTKLPPVALAASGENRPAQQFAPLPESLFRPLPP
YEDLPRPLSPSGASALIDEGKETVADTRSPVLDAEAEPGFAVMRGLALHKLLQMLPGIAE
AERRDAAERYLARAGAEWSEAERGRALASVFSILADPRFAPLFGSSSRAEVSIMGSLEVK
GRKRSISGKIDRLAVTSGKVSIVDYKTNRPAPATIAEVPPAYVLQLALYRALLQPLYPGH
EISAALLFTEAPRLIELPAAVMDDALARLTGA
NT seq 3519 nt   +upstreamnt  +downstreamnt
atgaaaaaggcctacccgatcccgagcgataccgcctccagccaagcgcgcgcttccgat
ccgctgaattcggcctgggtgtcggccaatgccggctccggcaagacccatgtgctggcg
cagcgcgtcatccggcttttgttgcgcggcaccgacccgtcgaagatcctctgcctgacc
tacacgcgcgccgccgccgccaacatgtcgaaccgggtgttttcgacgctttccgaatgg
acggcgctgggcgacacggaactggcggcacggatcgaagctctggacggccgccgggcc
gatcgcgacacgatgcgccgggcgcggcggctgttcgccgaggcgctggagacgccgggc
gggctgaagatccagaccatccacgccttctgcgaatcggtgctgcaccagtttccgctg
gaagccaacattcccgcgcatttcgaaatgctcgacccacagatggaggcgtcgcttttc
gctaccgcgcgacgcgacatgatttcgggtaccaccgccggcgaggcagggctggccggg
gccttcgccaccgtgctggagcgcggcggcgaagccggtctcgacgcgctgcttgccgag
atcgtgcacaagcgcgacggcttacgcgccttcatcggcgcgcttggccgtgacgggccg
ggcttccagccgctgttcgacgaattccggttccgcgccggcgaaacggccgaaggcata
gccacctccgtctggccgctgccgggtttcctgcccgactattttgtcggcttcgcccag
actgccgaagccaccgacgcccgcgcggtcttgaacaatttgctgccctatgcccgtgcc
gccttcgccgagaaggacccgatccgccggctgcagatgctcggcaaggccttcctcaag
gcggacggcgacccctacgacccacaaaaggcgttcaaaaaggcgctgctcgaccggctg
cccgaccttccagaacgctatctggctgccgtcaatgccataatcgaggtttcggacagg
ttggcgctgttccgaatgctggaaggcacatgtgccgcactgacgatcgccggctggctg
atcgcgcgctacgagcagctgaagcgcggccgcggcttcctcgatttcaacgatctcatc
acccgcacagtcagcctgctggcgcgacccgacgccgggccatgggtgcaatacaagctc
gaccagggcatcgaccatattctgctggacgaggcgcaggacaccagtcccgaccagtgg
gaggtggtgaagcggctgacggaagagttctttgccgggctcggccaacgcgagaccgtg
cagcggacgatgtttgctgtcggcgacgaaaagcagtcgatctattccttccagggtgcc
gcgccggactcgtttgccgacagccggcatttgtttgccggacgcgtgcgcgacgcggac
gcctcgttcgccgatctcaagctgacatggtcgttccgctcgaccgacgacgtgctggcc
gcggtcgaccgcgtcttcgccgaaccgggcgtacggcgcggcatcagccacgatcccgac
ccgctgagccacaaggcgatccggaccgacgcgccgggctatgtcgaggtctggccgtcg
atcggcgccgatgcggtcgaggaacccgacgactggaccttgccggtcaaccatgccagc
gcgccggcagtgcgcgttgccgaacatgtcgccgcgaccatccaggcctggctccgcgac
ggcgagaccatcgaaggccagggacggaagctgacggccggcgacattcttgtgctggtg
cgcaagcgtgaccgctttgtgcacgcgctgtcgcgcagcctgaagaaccggcagatcccg
gtcgccggcgccgaccggctgagcctgccaggccatatcgcggtcaaggacctgatcgcg
ctcgggcatttcctcattcagccggaagacgacctgtcactggccgccgtgctgcgcagc
ccgatcttcgatgtttccgaggagcagctgtttgcgctggcaagcgggcggccatcggga
cagtcgctgatcggctcgctgagactgcatgccgaccaggacgccgcgctggccgccatc
gttagccggctggatgcctgggcggacgaggcggcgttcaagccggtgttcgaattctat
gccgcggcactcgcccgcgacgggctgcgcaagagaatgatcgcgcggctcggaccggaa
gccggtgacatcatcgacgaattcctgagcttttgtctcgccgaggaacggaccggcctg
ccggggctggaagctttcctggcgacgctggaaagcaccggccccgagatcaagcgtgag
atggaccagacccgcgacgaagtgcgcgtcatgacggtgcacgccgccaagggcctggag
gcgccagtcgtcttcctggtcgacggcggctcggcgccgttcagcgaccagcatctgccg
aggctgatgccgttccaaggctctggcgagcatttcgtcggcaagggctatctctggcgc
tcggccagcgacgtcgccaacggcttttccaagaccgcagccgcccgcgcgcgcgacctc
gccgacgacgagtaccgccggctgctctatgtcggcatgacccgcgccgaggatcggctg
atcgcctgcggctattgcggcaagcgcgcgccaagcactggcacctggcattcgatcgtc
agccgcgcactggtaggcgcgccggaaagcactgagcgcaagcatcccgccaccggcgag
cccgtacaccgcttccacatgaccaagctgccgccggtggcgcttgcggcgagtggagag
aacaggccggcgcagcagttcgcgcccttgcccgagagcctgttccggccgctgccgcct
tacgaggacctgccgcggccgctgtcgccgtccggcgcttcggcactgatcgacgagggc
aaggaaaccgtggccgacacacgctcaccggtgctggatgcggaggcggagcccggtttt
gctgttatgcgcgggttggcgctgcacaaactgctgcagatgctgcccggcatcgccgag
gccgaacgccgggatgcggcagagcgctatctggcgcgcgctggcgccgaatggtccgaa
gccgagcgcggcagggcgctcgcctcggtgttctcgatccttgccgatccgcgcttcgca
ccgctgttcggttcgtcatcgcgcgccgaggtttcgatcatgggcagcctcgaggtgaag
ggcaggaaacgctccatctccggcaagatcgaccgcctggcggtgacatcgggcaaagtg
tcgatcgtcgactacaagaccaaccggccggcaccggcgacgattgccgaggtgccgccg
gcctatgtgctgcagctcgcgctctatcgggcgctgcttcagccgctttatcccggccac
gagatctcggcagcactgctgtttaccgaggctccaaggctgatcgaactgccggcggcg
gtcatggacgatgcccttgctagactcacgggagcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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