KEGG   Mesorhizobium amorphae: A6B35_26245
Entry
A6B35_26245       CDS       T04446                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
mamo  Mesorhizobium amorphae
Pathway
mamo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mamo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A6B35_26245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mamo03400]
    A6B35_26245
DNA repair and recombination proteins [BR:mamo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A6B35_26245
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A6B35_26245
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 Kinesin AAA_22 N36 Microtub_bd SWI2_SNF2 DUF87 eIF3_p135
Other DBs
NCBI-ProteinID: ANT53122
UniProt: G6YAL6
Position
5607372..5610428
AA seq 1018 aa
MAKLPDKKTPSAAQDDRGAPKRRSPLTDFLDASEPLHKGGFAEAPQTEFSGTPLTGSIAD
WAEQIEREAEQQPKPKAAKKIPERSASPGRTARGTSMGGAATARERTAAGLNPVAGLDIS
LEEAETMTSSGVTATVAALSALIESGNPLHKDGVLWTPHRPARPEKSEGGITIKMVSDFE
PAGDQPTAIKDLVEGVDGNDRTQVLLGVTGSGKTFTMAKVIEETQRPALILAPNKTLAAQ
LYSEFKKFFPENAVEYFVSYYDYYQPEAYVPRTDTFIEKESSINEQIDRMRHSATRSLLE
RDDVIIVASVSCIYGIGSVETYTAMTFQMQIGDRLDQRALLADLVAQQYKRQDVNFVRGS
FRVRGDTIEIFPAHLEDRAWRISMFGDEIESITEFDPLTGQKTGELKSVKIYANSHYVTP
RPTLNQAIKSIKEELKLRLQELEKAGRLLEAQRLEQRTRFDLEMLEATGSCAGIENYSRY
LTGRQPGDPPPTLFEYIPDNALVFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCM
DNRPLRFEEWDAMRPLSVAVSATPGGWEMEQSGGVFAEQVIRPTGLIDPPVEVRPAKTQV
DDVVGEIRDTTRAGYRTLVTVLTKRMAEDLTEYLHEQGIRVRYMHSDIDTLERIEILRDL
RLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVIL
YADQVTGSMERAMAETNRRREKQMEWNAANGITPESVKSRISDILDSVYEKDHVRADISQ
FTDSAGAMMGNNLKAHLEALDKQMRDAAANLDFEKAARIRDEIKRLREMELAISDDPLAR
EVEGQSPASGREKGKHNKGVAKHRTAEEQERFRKLDEVRAAEEAAKAARHNLFRKPALDD
MGADGAVPVKKPLFAKPSIDDMGPGTDMPTPAGAVSRSLFKKQSAAEAHGSDFGIPGEAT
KPLFKKNSLDEMTVRRTETPIEGEKPVKRERAGIGSYEDPVDARREKRRPGKTGRPGR
NT seq 3057 nt   +upstreamnt  +downstreamnt
atggccaaacttcccgacaagaaaacgccctcggcggcgcaagacgaccgtggcgcgccg
aagcggcgcagcccgttgaccgatttcctcgatgcctcggagccgctccacaagggcggc
tttgccgaggcgccgcagaccgaattctccggtacgccgctgaccggctcgatcgccgac
tgggccgaacagatcgagcgcgaggccgagcagcagccgaagccgaaagctgcaaagaaa
atcccggagcgctccgcctctcctggccggacggcgcgtggcacctcgatgggtggcgcg
gcgacggccagggagcgcaccgcggccggtctcaacccggttgccgggctcgacatctcg
ctggaagaagccgagacgatgacctccagcggcgtcaccgccacggtggccgcgctctcc
gcgctcattgaatccggcaatcccctccacaaggacggcgtgctgtggacgccgcaccgc
cctgcccgcccggaaaaatccgaaggcggcatcaccatcaagatggtgtcggatttcgag
ccggcaggcgatcagccgacggcgatcaaggatctcgtcgagggcgtcgacggcaacgac
cgcacccaggtgctgctcggcgtcaccggctccggcaagaccttcaccatggccaaggtg
atcgaggagacgcaacgccccgccttgatcctggcgcccaacaagacgctggccgcgcag
ctctattccgagttcaagaaattcttcccggaaaacgccgtcgagtatttcgtctcctac
tacgactattaccagccggaagcctacgtgccgcgcaccgacaccttcatcgagaaggaa
tcctcgatcaacgagcagatcgaccgcatgcgccactcggcgacgcgctcgcttctcgag
cgcgacgacgtcatcatcgtcgcctcggtctcctgcatctacggtatcggttcggtcgag
acctacacggcgatgaccttccagatgcagatcggcgaccggctcgaccagcgcgctctg
ctcgccgatctcgtcgcccagcaatacaagcgccaggacgtcaatttcgtccgcggctcg
ttccgcgtgcgcggcgacacgatcgagatctttccggcccacttggaagaccgcgcctgg
cgcatctcgatgttcggcgacgagatcgagtcgatcaccgagttcgacccgctgaccggc
cagaagaccggcgagctgaagagcgtcaagatctacgccaactcgcactacgtgacgccg
cgcccgaccttgaatcaagccatcaagtcgatcaaggaagaactcaagctccggctgcaa
gagcttgaaaaggctggccgcctgctggaagcacagcggctggaacagcgcacgcgcttc
gatctggagatgctggaagcgaccggctcctgcgccggcatcgagaattattcgcgctat
ctgaccggccgccagccaggcgatccgccgccgaccctgttcgaatacattcccgacaat
gcgctggtcttcatcgacgaaagccacgtcaccgtgccgcagatcggcggcatgtatcgc
ggcgactttcgccgcaaggcgacgctggccgaatatggtttccgtctgccgtcctgcatg
gacaaccggccgctgcgcttcgaggaatgggacgccatgcgtccgctttccgtcgccgtc
tcggcaacgccgggcggctgggaaatggaacagtccggcggcgtgttcgccgagcaggtc
atccgtcccaccggcttgatcgacccgccggtcgaggtgcgtcccgccaagacccaggtc
gacgatgtcgtcggcgagatccgcgacacgaccagggccggctaccgcacgctggtcacc
gtgctgaccaagcgcatggcggaggacctgaccgagtacctgcacgaacagggcatccgc
gtccgctacatgcactccgacatcgacacgctggagcgcatcgagatcctgcgcgaccta
cgcctcggcgccttcgacgtgctggtcggcatcaaccttttgcgcgaaggcctcgacatt
cccgaatgcggtttcgtcgccatcctcgacgccgacaaggaaggttttctgcgttcggaa
acctcgctgatccagaccatcggccgcgccgccagaaacgtcgacggcaaggtcatcctc
tatgccgaccaggtcaccggctcgatggagcgggcaatggccgagaccaaccgccgccgc
gaaaagcagatggagtggaacgccgccaacggcatcacgccggaatcggtcaagtcgcgc
atctccgacatcctggactcggtctacgagaaggaccatgtccgcgccgacatttcgcaa
ttcaccgacagcgccggcgccatgatgggcaacaatctcaaggcgcatctcgaggcgctc
gacaagcagatgcgcgacgccgccgccaatctcgacttcgagaaggccgcccgcatccgc
gacgagatcaagcggctgcgcgagatggaacttgcgatctccgacgacccgctggcgcgc
gaggtggaaggccaaagtcctgcctcaggccgcgagaagggcaagcacaacaagggtgtg
gccaaacatcgtacggccgaggaacaggagcgtttccgcaagctcgatgaggtacgtgcg
gccgaagaggcggccaaggctgcccggcacaaccttttccgcaagccggcgctagacgac
atgggcgccgatggcgccgtaccggtgaagaagccgctgtttgccaaaccgtcgattgac
gacatgggcccgggcaccgacatgccgacgccggcgggcgccgtctcgcgctcactgttc
aagaagcagtcggcggccgaggcgcacggctccgacttcggcattccgggcgaggccacc
aagccgctgttcaagaagaactcgctcgacgaaatgacggtgcggcgtaccgaaacgccg
atcgaaggcgaaaagccggtcaagcgcgaacgcgccggtatcggctcctacgaggacccg
gtagatgcccgccgcgagaaacgccggcccggcaagactggcagacccggtcggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (22)   

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