KEGG   Mycobacterium avium subsp. paratuberculosis MAP4: MAP4_2971Help
Entry
MAP4_2971         CDS       T02662                                 

Definition
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mao  Mycobacterium avium subsp. paratuberculosis MAP4
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:mao00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    MAP4_2971
Enzymes [BR:mao01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     MAP4_2971
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MAP4_2971
DNA repair and recombination proteins [BR:mao03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     MAP4_2971
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
Position
complement(3292920..3293783)
Genome map
AA seq 287 aa AA seqDB search
MPELPEIEALADHLRRHAVGLPIGRVDVAALSVLKTFDPPISALHGQTVVGAERWGKYLG
LRTEGLFLIAHLSRAGWLRWSDRLTAAPLRPGKGPIALRVHLGTPGAAPGFDLTEAGTQK
RLAVWLVDDPARVPGIAALGPDALDLDVDALADLLAGNTGRIKTVITDQKVIAGIGNAYS
DEILHVAKISPFATAGKLSDKQLATLHDAMVTVLTDAVSRSVGQGAAMLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKILADRRMSRLLK
NT seq 864 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgaactgcccgagatcgaagcgctggccgaccacctgcggcgccatgccgtcggg
ctgccgatcggccgggtcgacgtcgccgccctgtccgtgctcaagacgttcgacccgccg
atcagcgcgctgcacgggcagaccgtggtgggcgccgagcgctggggcaaatacctgggc
ctgcggaccgagggccttttcctgatcgcccatctgtcccgggcgggctggttgcgctgg
tcggaccggctgaccgcggcgccgctgcggcccggcaagggcccgatcgcactgcgggtg
catctgggcacacccggcgcggcccccggcttcgacctgaccgaggccggcacccagaag
cggctggcggtgtggctcgtcgacgacccggcgcgggtgcctgggatcgccgccctgggc
ccggacgccctggacctggacgtcgacgcgctggccgacctgctggccggcaacaccggc
cggatcaagacggtgatcaccgaccagaaggtgatcgccgggatcggcaacgcctacagc
gacgagatcctgcacgtcgcgaagatctccccgttcgccacggccggcaagttgtctgac
aaacagctggccaccctgcatgacgccatggtcacggtgctcaccgacgcggtgagccgg
tccgttggccagggggcggccatgctcaagggcgagaagcgttccggattgcgggtgcat
gcccgtaccgggttgccgtgcccggtgtgtggcgacaccgtgcgcgaagtgtcgttcgcg
gacaagtcttttcagtattgcccgacgtgccagaccggcggcaagatcctggccgaccgg
cggatgtcgcgtttgctgaagtag

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