KEGG   Marinobacter nauticus VT8: Maqu_0960
Entry
Maqu_0960         CDS       T00454                                 
Name
(GenBank) DNA polymerase III chi subunit, HolC
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
maq  Marinobacter nauticus VT8
Pathway
maq03030  DNA replication
maq03430  Mismatch repair
maq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:maq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Maqu_0960
   03430 Mismatch repair
    Maqu_0960
   03440 Homologous recombination
    Maqu_0960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:maq03032]
    Maqu_0960
   03400 DNA repair and recombination proteins [BR:maq03400]
    Maqu_0960
Enzymes [BR:maq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Maqu_0960
DNA replication proteins [BR:maq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Maqu_0960
DNA repair and recombination proteins [BR:maq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Maqu_0960
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: ABM18056
UniProt: A1TZ87
Position
complement(1093024..1093533)
AA seq 169 aa
MQGNQPNPPEPGSPAAGPSGQDDRNQRYWFHILAQNTHAARNLHAAKLVDKAWQQGDRVC
VLCDTEEQALELDDLLWNFTPEAFIPHSIAKAATTPCSDPVGILLYPPAAVDWDTVIVLS
SALPEDADQYRRLALVAHNDPAVLNQARGHYKQLRSLGIEARVHDMRKR
NT seq 510 nt   +upstreamnt  +downstreamnt
atgcagggtaaccagccaaacccaccggagcccggcagcccagctgccggcccctccggc
caggacgacagaaaccagcgctactggttccacatcctcgcccagaacacccacgccgcc
cgcaacctccacgctgccaaactcgtggacaaagcctggcagcagggcgaccgtgtgtgc
gttctttgtgacaccgaagaacaggccttggaactcgacgacctgttgtggaacttcacc
cccgaagccttcatccctcacagcatcgccaaagcagcaaccacaccttgctccgacccc
gtcggcattttgctctacccgccagccgcggtggactgggacaccgtcatcgtattgtcc
tcagcgctgcctgaagacgctgaccaataccgccgcctggcactggttgcccataatgat
ccggcggtattgaaccaggcgcgggggcattacaagcagttgcggtcactgggcattgaa
gctcgggtgcatgatatgcggaaacgctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (32)   

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