KEGG   Marinobacterium aestuarii: A8C75_19160
Entry
A8C75_19160       CDS       T04398                                 
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
mars  Marinobacterium aestuarii
Pathway
mars03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mars00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A8C75_19160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mars03019]
    A8C75_19160
   03016 Transfer RNA biogenesis [BR:mars03016]
    A8C75_19160
Enzymes [BR:mars01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     A8C75_19160
Messenger RNA biogenesis [BR:mars03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A8C75_19160
Transfer RNA biogenesis [BR:mars03016]
 Prokaryotic type
  tRNA degradation factors
   A8C75_19160
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 RNase_II_C_S1 HTH_12
Other DBs
NCBI-ProteinID: ANG64379
UniProt: A0A1A9F3N9
Position
complement(4376233..4378689)
AA seq 818 aa
MTNDWLKRDPQAQAEAEKYGKPAPSRDFLLEFLQEWGAPISHGRLCRELGIDDEDCVEAV
SRRLKAMCRDGQLMSNRRSEFGIIKKMDLIAGRVIGHRDGFGFVSPDAKGDDLFISPRQM
RQVFDGDRVLVQEVSIDYRGRREGKIIEVLERGTRTLVGRYKVQGDLGYLIPENQRITQQ
IMIAADRTGSPPFRDGQLVVAELLQQPGKHEIPEARVVEVLGDHMAPGMEIKVAIHNYEI
PDEWPDAVRQEVASLSAEVEESAKLNRVDLRHLPLVTIDGEDAKDFDDAVYAERKRTGGW
RLWVAIADVSWYVRPGTELDKEGISRGNSVYFPEFVVPMLPEVLSNGLCSLNPHVDRLAM
VCEMTISASGKLSGYQFYEAVIQSHARLTYNKVSTMLTEPKSAQGKQLRGEYAAVVPHLE
DLYSLYFGLRKARDVRGAIDFETTETRILFSAARKIEEIVPVVRNDAHKVIEECMLCANV
ATARFLAKLKVPALYRIHEGPKEQKLVSLRAYLGELGLSLGGGDKPEPSEYQKLAAQIEK
RPDRLVVQTMMLRSMRQAVYSPENLGHFGLAYAAYTHFTSPIRRYPDLLVHRAIRAAIHA
EGDRSLMDRLKSAFSSGSSKTMRRPDGFKSNPQFRYRYTEEQMVQLGEHCSMTERRADDA
TRDVMSWLKCEYMLDQVGEEHEGVITAVTGFGCFVELKQVYVEGLVHITALPSDYYHFDA
AKQRLVGERMRKTYKLGDAVRVKVLRVDLDERKIDFELLDKPGSGKTKSTRERLAEGKLD
DRSSAKSEGGNAGNGAKPAGKKPAGKSRRPRSRNRRPS
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgacaaacgactggctaaaacgtgacccccaggctcaggccgaagcagaaaaatatggc
aagccggcaccgagccgcgacttcctgctggaattcctgcaggagtggggcgcgccgatc
agccacggccgcctgtgccgtgagctgggtatcgatgatgaagactgtgttgaagcggtg
tcccgccgcctgaaggccatgtgccgtgacggccagctgatgagcaaccgtcgcagcgaa
ttcggcatcatcaagaaaatggatcttatcgccggccgtgttatcggccaccgcgatggc
tttggttttgtatcgccggacgccaaaggcgatgacctgttcatcagcccgcgtcagatg
cgtcaggtattcgacggtgaccgtgtgctggtgcaggaagtcagcattgactaccgcggc
cgccgcgaaggcaagattatcgaagtgctcgagcgcggtacccgcactctggtggggcgc
tataaggtgcagggcgacctgggctacctgattccggaaaaccagcgcatcacccagcag
atcatgatcgcggcggaccgcacgggcagcccaccgttccgtgatggccagctggtggtg
gccgagctgttgcagcagccgggcaagcacgagatccctgaggcccgcgtggtcgaagtg
ctgggcgatcacatggcgccgggcatggaaatcaaggtggccatccacaactacgaaatt
cccgatgaatggcccgatgccgtgcgtcaggaagtggccagtctgtcggctgaggtggag
gaatccgccaagctgaaccgtgtcgacctgcgccatctgccgctggtcaccatcgacggt
gaagacgccaaggatttcgacgatgctgtctatgccgagcgcaagcgcaccggcggctgg
cgtctgtgggtggcgattgccgatgtgtcctggtatgtccgccccggcactgagctcgac
aaggaaggtatcagccgcggcaactcggtgtacttccccgagtttgtcgtgcccatgctg
cctgaagtgctgtccaacggcctctgctcgctgaacccccatgtggatcgtctggcgatg
gtgtgcgagatgaccatcagcgccagcggcaagctgtcgggttaccagttctatgaagcg
gtgattcagtcccatgcgcgcctgacctacaacaaggtctccaccatgctgacagagccg
aaaagcgcccagggcaagcagctgcggggtgaatatgccgccgttgtgccgcaccttgaa
gacctgtacagcctgtactttgggctgcgcaaggcgcgggatgtgcgcggtgccatcgat
ttcgagaccaccgagacccgtatcctgttctccgcagcgcgcaagatcgaagagatagta
ccggtcgtgcgcaacgacgcccacaaggtgatcgaagagtgcatgctgtgcgccaacgtg
gcgacggcgcgtttcctggccaagctcaaggtgccggcactctaccgcatccatgaaggc
ccgaaagagcagaagctggtgagcttgcgggcttatctgggtgagctgggtctgtcactc
ggtggtggcgataagccggagccgtccgagtaccagaaactggcggcgcagatcgaaaag
cgtccggatcgtctggtcgtacagaccatgatgctgcgctccatgcgccaggccgtgtac
agccctgaaaatctggggcactttggtctggcctatgcggcctatactcacttcacctcg
ccgatccgtcgttatccggatctgctggtgcacagggcgattcgtgccgccattcatgcc
gagggtgatcgctcactgatggatcgcctcaagtcggccttcagcagcggctcgtccaag
accatgcgccggccggatggcttcaagtccaatccgcagtttcgttaccgctacacagaa
gagcagatggtgcagctgggcgagcactgctccatgaccgagcgtcgcgccgatgatgcc
acccgggatgtcatgtcctggctcaagtgcgagtacatgctggatcaggtgggcgaggag
cacgaaggcgtgattaccgccgtgaccggctttggctgctttgtcgagctcaagcaggtg
tacgtcgaaggtctggtgcatattactgcgctgccgtcggactactatcacttcgatgcc
gccaagcagcgtctggtgggtgagcgcatgcgcaagacctacaagctcggcgatgccgtg
cgggtgaaggtgctgcgggtggacctggatgagcgcaagatcgatttcgagctgctcgac
aaacctggctccggcaagaccaagagcacgcgtgagcgtttggctgaaggcaagctggac
gaccgctcgagtgccaagtctgaaggcggcaatgccggtaacggcgccaagcccgccggc
aagaagcctgcaggcaagagccgtcggccgcgctcgcgcaaccgccgtccgtcctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (40)   

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