KEGG   Massilia violaceinigra: CR152_25090
Entry
CR152_25090       CDS       T05157                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mass  Massilia violaceinigra
Pathway
mass03410  Base excision repair
mass03430  Mismatch repair
mass03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mass00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CR152_25090 (recJ)
   03430 Mismatch repair
    CR152_25090 (recJ)
   03440 Homologous recombination
    CR152_25090 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mass03400]
    CR152_25090 (recJ)
DNA repair and recombination proteins [BR:mass03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     CR152_25090 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CR152_25090 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CR152_25090 (recJ)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB Glyco_transf_4
Other DBs
NCBI-ProteinID: ATQ77409
UniProt: A0A2D2DR10
Position
5863833..5865527
AA seq 564 aa
MTRITTRPCSFRTSEMLRQTGVHPVLARLYAARGLTDARELSSELGSLMAPAGLLHIDAA
AVFLADAIKAAKKMTIVADYDCDGATACAVALRGLRAMGATVDYIVPNRFEYGYGLTPEI
VELTAREKAPDIIITVDNGIASIDGVLEAKRRGIDVVVTDHHLPGDTLPEARVIVNPNQP
ECGFPSKHLAGVGVVFYVLLALRAELRKRGVFDAQTQPKLDSLLDLVALGTVADVVRLDS
NNRILVAQGLKRMRAGRMHPGVAALFRVAGREARSASPFDLGFALGPRLNAAGRLEDMSL
GIECLVTDDDGRAWAIAQQLNEINLKRREIEADMQDTALLHLDAYEPADSNTISVFDESW
HQGVIGIVASRLKEKFFRPTITFAPGAEGWIKGSGRSIPGFHLRDALDLVSKRAPSLIDK
FGGHAMAAGLTIRADAFEAFSAAFEEVGRAWLNTQQLERIIETDGPLEDAYYTTEFIGLM
DGQVWGQGFAPPVFCDEFRVVSQRILKERHLKLQLERNGQRYDAIWFGHTASVGERARVA
FRLDANEYNGVTRVQLLVEHAEPA
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgacccgtatcaccactcgcccctgctctttccgtacgtccgaaatgctgcgccagacc
ggcgtgcatcccgtgctcgcgcgcctgtacgccgcgcgcggcctgaccgacgcgcgcgaa
ttatcgagtgagctgggcagcctgatggcgcccgccggcctgctgcacatcgacgccgcc
gccgtgttcctggccgacgccatcaaggccgccaaaaaaatgaccatcgtggccgactac
gattgcgacggcgccaccgcctgcgccgtcgccctgcgcggcctgcgcgcgatgggtgcc
acggtcgactacatcgtccccaaccgcttcgagtacggctacggcctcacgcccgaaatc
gtggaactgaccgcgcgcgaaaaggcgccggatatcatcatcaccgtcgacaacggcatt
gccagcatcgacggcgtgctggaagcgaagcggcgcggcatcgacgttgtcgtcaccgac
caccaccttcccggcgatacactgccggaagcgcgcgtgatcgtcaatccgaaccagccc
gaatgcggctttcccagcaagcacctggccggtgttggcgtggtgttctacgtgctgctc
gcactgcgcgccgaactgcgcaaacgcggcgtattcgatgcccagacccagcccaagctg
gacagcctgctcgacctggtcgccctgggcaccgtggccgacgtggtacggctcgactcg
aacaaccgcattctggtggcgcagggtctcaagcgcatgcgcgcgggccgcatgcacccc
ggcgtggccgcgctgttccgcgtggccggacgcgaagcacgcagcgcctcgccgttcgac
ctggggtttgcgctcggtccgcgcctcaatgccgccgggcgcctggaagacatgtcgctc
gggatcgagtgcctggtcaccgacgacgacggacgcgcctgggccatcgcgcagcagctc
aacgaaatcaacctgaagcgccgcgaaatcgaggccgacatgcaggatacggccctgctg
cacctcgacgcctacgagccggccgacagcaacacgatcagcgtgttcgacgaatcctgg
caccagggcgtcattggcattgtcgcctcgcgcctgaaagaaaaattctttcgcccgacg
atcaccttcgcgccgggtgcggaaggctggatcaagggctcgggacggtcgattccgggc
tttcacctgcgcgacgcgctcgacctggtatcgaagcgcgcaccaagcctgatcgataaa
ttcggcggccatgccatggcggccgggctgaccattcgcgccgatgcgttcgaggccttt
tccgcggcgttcgaggaagtcgggcgcgcctggctcaacacgcagcagctcgaacgcatc
atcgaaaccgacggtccgctggaagacgcctactacacgaccgaattcatcggcctgatg
gatggtcaggtgtggggccagggctttgcgccgccggtgttttgcgatgagttccgggtg
gtcagccagcgcattttgaaagagcgccatctcaagctccagcttgagcgcaacggccag
cgttacgacgccatctggttcggccacaccgcctcggtcggcgagcgcgcacgcgtggca
ttccgcctcgacgccaacgaatacaacggcgtcacgcgggtgcaactgctagtcgaacac
gccgagccggcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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