KEGG T01296: Micau

Micromonospora aurantiaca: Micau_1144

Entry

Micau_1144 CDS T01296

Definition

DNA ligase D, 3'-phosphoesterase domain-containing protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mau Micromonospora aurantiaca

Pathway

mau03410	Base excision repair
mau03420	Nucleotide excision repair
mau03430	Mismatch repair
mau03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mau03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mau03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mau03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mau03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_M

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1159346..1160380)

AA seq 344 aa
MADRLEEYRRKRDAARTPEPVPERAPGRKRSARRAPRFVIQQHHARSLHWDLRLEHDGVL
ASWAVPRGLPRDPGRNHLAVHTEDHPMEYLTFHGEIPAGEYGGGRMIVHDTGTYRAEKWR
DDEVIVVLDGERTKGRYVLFATGGRGRDWMIRRTDPAPEGWTPMPELVRPMLPAEGGRLP
RDAAAWGYELRWAGVRAMAYVSGGRLRLLDGDDTEVTGDYPWTRAMAEALAPAEAVIDGV
LVRIDPAGRVRPPTRRDGQFLAVDLLWLEGVSSLDVPYAQRRDLLDGLALTGPHWQTPPW
FPGVGADALRAAREQGLPGVVAKRLDSPYEPGRRSRHWLSIDAS

NT seq 1035 nt +upstreamnt +downstreamnt
atggcggaccggctggaggagtaccggcggaaacgggacgccgcgcgtaccccggaaccg
gtgcccgagcgggctcccgggcggaagcggtcggcgcggcgcgcaccccgcttcgtcatc
cagcagcaccacgcccggagcctgcactgggacctgcggctggagcacgacggcgtgctg
gcctcctgggccgtgccgcgcggcctgccccgcgacccgggccgcaaccatttggccgtg
cacaccgaggaccacccgatggagtacctgacgttccacggggagatccccgccggggag
tacggcggcgggcggatgatcgtgcacgacaccggcacctaccgcgcggagaagtggcgc
gacgacgaggtgatcgtggtgctggacggcgagcgcacgaagggccggtacgtgctgttc
gccaccggcggccggggccgggactggatgatcaggcgtaccgacccggcgccggagggc
tggacgccgatgcccgagctggtccgcccgatgctgcccgccgagggcgggcggctgccg
cgcgacgccgccgcctgggggtacgagctgcgctgggcgggcgtgcgcgcgatggcgtac
gtctcgggcggccggctgcggctgctcgacggcgacgacacggaggtcaccggggattac
ccgtggacgcgggcgatggccgaggcgctggccccggccgaggcggtgatcgacggcgtg
ctggtaaggatcgacccggccgggagggtccgtccgccgacccggcgcgacgggcagttc
ctcgccgtcgacctgctctggctggagggcgtgtccagcctcgacgtgccgtacgcgcaa
cgccgtgacctgctcgacggtctggcgctcaccggtccgcactggcagactccgccgtgg
ttcccgggagtcggcgcggacgccctacgggccgcccgtgagcaggggctcccgggagtg
gtggcgaaacgcctcgactccccgtacgagccgggccggcgcagccggcactggctgagc
atcgacgcgagctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MAU (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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