KEGG T00433: MAV

Mycobacterium avium 104: MAV_1056

Entry

MAV_1056 CDS T00433

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mav Mycobacterium avium 104

Pathway

mav03410	Base excision repair
mav03420	Nucleotide excision repair
mav03430	Mismatch repair
mav03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mav03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mav03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mav03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mav03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

992307..994607

AA seq 766 aa
MNAPRAWPAEPTATPRVKLTNADKVLYPATGTTKADVFDYYTRIADVMIPHIAGRPVTRK
RWPNGVDQESFFEKQLASSAPDWLPRASVTHRSGTTTYPIIDSATGLAWIAQQAALEVHV
PQWRFVAEWTRSRAEELKPGPATRLVFDLDPGEGVTMAQLAEVARAVRDLIDGIGLQTFP
LTSGSKGLHLYTPLTEPVSSKGATVLAKRVAQQLEKTMPKLVTSTMTKSLRAGKIFVDWS
QNNGSKTTIAPYSLRGRDHPTVAAPRTWDELDDPALRHLRYDEVLTRVARDGDLLAELDA
SDNQTPVPDRLTKYRSMRDASKTPEPVPAAKPAAGRGNTFVIQEHHARRLHYDFRLERDG
VLVSWAVPKNLPDTPAVNHLAVHTEDHPLEYGGFEGVIPKGEYGAGRVVIWDSGTYDAEK
FQDDEVIVNLHGRKISGRYALIQTEGDQWLAHRMKDQNVFDFDTIAPMLATHGSVSALKA
SQWAFEGKWDGYRLLVEADHGTLRVRSRRGREVTGEYRELRSLAKALEEHHAVLDGEAVV
LDKRGVPNFHEMQNRGKSARVEFWAFDLLYLDGRSLLRARYRDRRKLLEMLASGGDLTVP
ELLPGDGDQALRQSAERGWEGVIAKRRDSTYQPGRRSSSWIKDKHWNTQEVVIGGWKAGE
GGRSSGIGSLLMGIPGPGGLHFAGRVGTGFTERDLANLKKTLAPLRTDQSPFDAPLPRSE
AKGVTFVEPVLVGEVRYSEWTPDDRLRQSSWRGLRPDKEASEVVRE

NT seq 2301 nt +upstreamnt +downstreamnt
atgaacgcgccgcgcgcttggcccgctgagccgacagcgacgccgcgggtgaaactgacc
aacgccgacaaggtgctctatcccgcgacgggaaccaccaaagccgacgtcttcgactac
tacacgcggatcgccgacgtgatgatcccgcacatcgccgggcgtccggtcacccggaag
cgctggcccaacggcgtcgatcaggaatcgttcttcgagaagcagctggcctcctcggca
ccggactggctgccgcgcgccagcgtgacccaccgatccggcacgacgacctatccgatc
atcgacagcgccaccggcctggcctggatcgcccagcaggcggcgctggaggtgcacgtg
ccgcagtggcggttcgtcgcggagtggacccgaagccgggccgaagaactcaaacccggc
ccggcgactcgactggtgttcgaccttgacccgggcgaaggcgtgacgatggcccagctc
gccgaggtggcgcgcgccgtccgcgacctgatcgatgggatcgggctgcagacgtttccg
ctcaccagcggcagcaagggactgcacctgtacacgccgctgacggagccggtgagcagc
aaaggcgccaccgtgctggccaaacgcgttgcgcagcaactggaaaagactatgccgaag
ctggtcacgtcgaccatgaccaagagcctgcgggcgggaaagatctttgtggactggagc
cagaacaacggctccaagacgaccatcgcgccctattcgctgcgcgggcgcgaccacccc
accgtcgccgcgccgcgcacctgggacgaactcgacgacccggcgctgcgtcacctgcgc
tacgacgaagtgctgacccgggtcgcccgcgacggtgacctgctcgccgagctggacgcc
tccgacaaccagacaccggtgccggaccgcctgaccaaataccgcagcatgcgcgacgcc
tccaaaacgcccgagccggttccggccgcgaaacctgctgcgggacgaggcaataccttc
gtcatccaagagcaccacgcccggcggctgcactacgacttccggctggagcgcgacggg
gtgctggtgtcctgggcggtgccgaagaacctgcccgacacccccgcggtgaatcacctg
gccgtacacaccgaggatcacccgctggaatacggcgggttcgagggcgtcatccccaaa
ggcgaatacggggcgggcagggtggtcatctgggactccggaacctatgacgccgagaag
ttccaggacgacgaggtgatcgtcaacctgcacggccgcaagatctccgggcgctacgcg
ctgatccagaccgagggcgaccaatggctggcgcaccggatgaaggaccagaacgtcttc
gacttcgacacgatcgccccgatgctcgccacccacggttcggtgtcggcgctcaaggcg
agccagtgggcgttcgagggcaaatgggacggctaccggctactggtcgaggccgaccac
ggcaccctgcgggtgcggtcccggcgcggtcgcgaagtcaccggtgagtaccgcgaatta
cgctcgctggcaaaggctctcgaggagcaccacgcggtgctcgacggcgaggccgtggtg
ctggacaagcgcggcgtgcccaacttccacgagatgcaaaaccgcggcaagagcgcgcgg
gtcgaattctgggcgttcgacctgctctacctcgacggccgctcgctgctgcgggcccgc
taccgcgatcggcgaaaactgttggaaatgctggcctccggcggtgatctgaccgttccc
gagctgctgcccggcgacggcgaccaagcgctgcggcagtccgccgagcgcggttgggag
ggcgtgatcgccaagcggcgcgactccacctatcagccgggccggcgctcgtcctcctgg
atcaaggacaagcattggaacacccaggaagtcgtgatcggcggctggaaggccggggaa
ggcggacgcagcagcggcatcggttccctgctgatgggcattccgggcccgggcggcctg
cacttcgccggccgtgtcggcaccgggttcaccgaacgcgacctggccaacttgaagaag
acgctggccccgctgcgcaccgaccaatcgcccttcgatgcgccgcttccccgcagcgag
gccaagggcgtcacgttcgtcgagccggtgctggtgggcgaggtgcgctacagcgagtgg
acaccggatgaccggctgcgccaatcgagttggcgcgggctgcggccggacaaggaggca
agcgaggtggtacgcgagtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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