KEGG   Candidatus Methylopumilus turicensis: BN1209_0387
Entry
BN1209_0387       CDS       T03844                                 
Symbol
yibK
Name
(GenBank) putative rRNA methylase
  KO
K03216  tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
Organism
mbac  Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:mbac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mbac03016]
    BN1209_0387 (yibK)
Enzymes [BR:mbac01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.207  tRNA (cytidine34-2'-O)-methyltransferase
     BN1209_0387 (yibK)
Transfer RNA biogenesis [BR:mbac03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    BN1209_0387 (yibK)
SSDB
Motif
Pfam: SpoU_methylase
Other DBs
NCBI-ProteinID: CEN55437
UniProt: A0A0B7IWH6
Position
1:complement(345478..345942)
AA seq 154 aa
MFNIVLFEPEIPPNTGNIIRLCANTGAQLHLVKPLGFSLEDKQLKRAGLDYHEYANLQIH
ENWQACKIALAGKRMFAITTKGSTSHGNIKFEKDDVFVFGPETRGLPEEIRNEFSAEHRV
RLPMLPQSRSLNLSNSAAVLLYEAWRQIGFEGGV
NT seq 465 nt   +upstreamnt  +downstreamnt
atgtttaatatcgtcttatttgaaccagaaattccaccaaacacaggcaacattattcgt
ctgtgtgccaatacgggcgcgcaactgcacttagttaaaccgctcggattctcattggaa
gataagcagcttaaacgcgctggcttggattatcacgaatacgccaacttgcaaatccac
gaaaattggcaggcgtgcaaaatagctttagctggcaagcgcatgttcgctatcacaacc
aaaggcagcacttcacacggcaacatcaagtttgagaaagacgatgtgtttgtgtttgga
ccagaaacgcgcgggctaccagaagaaatacgaaatgaatttagcgcagagcatcgcgtc
aggttgccgatgttgccgcaaagccgcagtttgaacttatctaactcagcagcagtgttg
ctttatgaagcttggaggcagataggctttgagggcggggtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (43)   

Download RDF
DBGET integrated database retrieval system