KEGG   Methanosarcina barkeri 3: MSBR3_0553
Entry
MSBR3_0553        CDS       T04533                                 
Name
(GenBank) Cell division protein FtsH
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
mbak  Methanosarcina barkeri 3
Brite
KEGG Orthology (KO) [BR:mbak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbak03019]
    MSBR3_0553
   03009 Ribosome biogenesis [BR:mbak03009]
    MSBR3_0553
   04131 Membrane trafficking [BR:mbak04131]
    MSBR3_0553
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mbak04147]
    MSBR3_0553
Messenger RNA biogenesis [BR:mbak03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     MSBR3_0553
Ribosome biogenesis [BR:mbak03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    MSBR3_0553
Membrane trafficking [BR:mbak04131]
 SNARE
  SNARE associated proteins
   Others
    MSBR3_0553
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    MSBR3_0553
Exosome [BR:mbak04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MSBR3_0553
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N AAA_16 RuvB_N AAA_2 AAA_5 AAA_14 AAA_22 CDC48_2 TIP49 AAA_33 AAA_24 Parvo_NS1 AAA_28 IstB_IS21 AAA_18 Mg_chelatase RNA_helicase nSTAND3 NACHT Sigma54_activat ABC_tran AAA_7 AAA_17 Vps4_C ATPase_2 Zeta_toxin NB-ARC ATPase PhoH TsaE AAA_25 SLFN-g3_helicase DUF815 Sigma54_activ_2 AAA_19 bpMoxR ResIII KAP_NTPase RNA_pol_Rpb1_5
Other DBs
NCBI-ProteinID: AKB81131
UniProt: A0A0E3SIH0
Position
complement(758377..760671)
AA seq 764 aa
MTDNEKIAAKLKVAEADQRDVGKGIVRVDDSFREKLGLKPFDVIEIKGGKSTSALVGRPY
PSDSGLDIIRMDGLIRTNAKTSIGEYVDIRKADWKEAKSVTLAPVAKGMQIYAPSETLKA
VFMNRTVSKGDFISTTSLRRSRERETFGKGIMFEDFFQDFFGPGMGQSFGLGEIKLQVIS
TSPSGIVKITDMTEVELLPEAAEVTPEQNVPTVMYEDLGGVKDAITKIREMIELPLKHPE
LFDRLGIDAPKGVLLYGPPGTGKTMLAKAVANESDAYFISVNGPEIMSKYYGESEKGIRD
VFEEAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTN
RPEAIDMALRRPGRFDREIELRVPDTEGRLEIFQIHTRGMPLAENVNLMDFAQITYGFVG
ADIAALCREAAMSSLRRILPKINLNEPEIPSEILDTLRVTREDFENALKDVQPSAIREIL
IEIPNVSWEDVGGLEGVKQLLKEAVEWPLKSPESYRDIGVEAPKGVLLYGPPGTGKTLLA
KAIAHESEANFITAKGSDLLSKWYGESEKRIAEVFSRARQVAPSIIFLDELDSLAPIRGA
SVGEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDIIDPALLRPGRFDELILVPVPD
AGARKEIFKVQTSKMSLAEDVDIEKLVSMTDQYTGADIAAVCKKAGRDALREDLHAKEVK
QKHFLQAIAETGPSVTPDTMKYYHAVQSGLRKRQSKEIETPFYS
NT seq 2295 nt   +upstreamnt  +downstreamnt
ttgacagacaacgaaaaaatagctgcaaaactaaaagtcgcagaagctgatcaaagagac
gtcggaaaaggaattgtccgggtggatgacagtttccgggaaaagctgggccttaagcct
tttgacgttattgaaataaaaggaggaaaatcaacttcagccctggtagggcgtccgtat
cccagcgactcgggccttgatattatccgcatggatgggctcatccgtactaatgcaaaa
actagcataggggagtacgtggacattcgcaaagctgactggaaagaagcaaagagtgta
actcttgcgcctgtagctaagggcatgcagatttatgctccaagtgaaactcttaaagcc
gtattcatgaaccgtacggtttcgaagggtgattttatttccaccacaagcttgagacga
tcccgagagagggagacttttgggaaaggaattatgttcgaggatttctttcaggacttt
tttggtccaggtatgggacagtcatttgggctgggagaaataaagttacaggtgatctcc
acttccccgtctggaatagtaaagattacagatatgacagaggttgagctcctacccgaa
gctgcagaagtaacacctgaacagaatgttcccacagtcatgtatgaagatctgggtggg
gttaaagacgctatcaccaaaataagagaaatgatagaattacctttgaagcaccctgaa
ctttttgatagactgggaattgatgctccaaaaggagtactgctttacggaccgcctgga
acaggtaagacaatgcttgcaaaagcagttgcaaatgagtccgacgcctactttatctca
gtcaatggtccggaaattatgtccaagtactacggtgagtccgaaaaagggatcagagat
gtctttgaagaagcagagaaaaacgctcctgcaatcattttccttgatgaaatcgactcc
attgcacctaagagggctgaggtaaccggagaagttgaaaggagagttgtagctcaactc
ctctctctgatggacgggcttaaggctcgcaagaacgtgattgtgatagggtcaaccaac
cgtcctgaagcaattgatatggcacttcgccgccctggtagatttgatagagagattgaa
ttaagggttccggacactgaaggaaggctcgagatcttccagatccacacaagaggtatg
ccacttgccgaaaacgtaaatctcatggacttcgctcagataacttatgggttcgtggga
gctgacattgctgcactttgccgggaagctgcaatgagttccttgagacggattcttccg
aagattaacctcaatgaacctgaaattccaagtgagatccttgacacacttcgggtcaca
agggaagacttcgaaaacgccttgaaagatgtccagccatctgctataagagagatcctt
atcgaaattccgaatgtgagctgggaagatgtaggcggcctggaaggagtaaaacaactt
ttgaaggaggccgtggagtggccccttaaaagtccggagtcatacagggatataggagtt
gaggctcccaaaggagtacttttatatggtcctcctggtactggaaagactctccttgca
aaagctattgcccacgagtccgaagctaacttcattaccgcaaaaggaagcgatctgctt
tccaagtggtacggagagtcggaaaaaagaattgccgaggttttttcacgggcaaggcag
gttgctccttcaattattttcctggatgagcttgattctcttgcgccaattcggggagct
tccgttggtgagccacaggttacagccagaattctgaatcagctgctttccgagatggac
gggcttgaggaactcagagctgtagttgtaataggtgcaaccaatcgtcctgatattata
gatccggctcttctaaggcctggacgttttgacgagttaattctcgttcccgttccggat
gcgggagctaggaaggaaatttttaaggtccagacctctaaaatgtcgcttgcagaggat
gttgacattgaaaaactggtttccatgaccgatcagtatacaggtgctgacattgcagct
gtatgtaaaaaagcaggaagagacgcacttcgggaagaccttcatgctaaagaggtgaag
cagaaacacttccttcaagcgattgctgaaaccgggccttcggttactcctgataccatg
aagtattaccatgctgtacagagtggcctgagaaaaaggcagtcaaaagaaatagaaact
ccattttatagctga

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