KEGG   Methanosarcina barkeri 3: MSBR3_3449
Entry
MSBR3_3449        CDS       T04533                                 
Name
(GenBank) Archaeal DNA polymerase II small subunit
  KO
K02323  DNA polymerase II small subunit [EC:2.7.7.7]
Organism
mbak  Methanosarcina barkeri 3
Pathway
mbak03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mbak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSBR3_3449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mbak03032]
    MSBR3_3449
Enzymes [BR:mbak01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MSBR3_3449
DNA replication proteins [BR:mbak03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    D-family DNA polymerases
     MSBR3_3449
SSDB
Motif
Pfam: Metallophos Metallophos_2 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AKB84027
UniProt: A0A0E3SQ30
Position
complement(4525772..4527865)
AA seq 697 aa
MDRKDIIRVVMEKEYQISPEAVELICSSNSPEALLRYVLSTVNDSVIVIGSEHIDLEGFA
AFSAGESLSDKVHVFCTEKRKIFSGASILSSRSNNPSSKPNSLLVPDSLSEPALSLKPDI
VTAAPDPIIKSSKDSVLDSVPDSVPVQDMLQDIAYEPALDTPNTLDTPSTLDTPNTLDTP
NTLDTPNTLDTPNTLDTKSSVTPSDQTSASYLASDSLSSVKAEPLTFLSRSSQAINRSNS
PFFGQENSLPSSSSNRIFRTEQSSSSSERGIFSSSRDEYKHYPGKNPVTVVSDITGHSTC
VGEYMQFVQYFRDRYSRLSEIIRGRINARPIESLKRRNFRRREDAGSEEISIIGMVSDIN
STTNGHKILSLEDPTGSFSVLIRNSDKELFELASRILLDEVIGVAGSITNDGSLMLATKL
IQPDVPNNIQRRTGSHGKAVLISDVHVGSSKFLEDAWLDFLDFLKGESDSDDMREIAASV
RYLVVAGDIVDGIGIYPDQELELDILDVYEQYKKAAEYFREIPEHIRVIISPGNHDAVRQ
AEPQPALPENIQAYFPENTVFVGNPAFMELDGVRLLIYHGRSIDDLVASVPGVSYQEPAG
AVLEMLKRRHLAPTYGSRVSISPEKKDYFIIDPVPDIIHTGHVHTLGVQRYKNVLLVNSG
TWQDQTEFQKRVNLVPVPARVPIVDLENFDVKILAFD
NT seq 2094 nt   +upstreamnt  +downstreamnt
atggacagaaaggatattataagggttgttatggaaaaagagtatcagatcagccctgag
gctgtagaacttatttgttccagtaattctcccgaagccctactcagatatgtcctttca
actgtaaatgactctgttattgtcatagggagcgaacatatagatcttgaaggctttgct
gctttttcagcaggtgagtcgctttcagataaagtacatgttttttgtacagaaaaaagg
aaaattttttccggtgcttccatactttcttccagatcaaacaatccatcttccaaacct
aactctcttttagtgcccgattccttatcagagcctgctctttctttaaagcccgatatt
gttactgcagctcctgacccaattataaaatcatctaaggactctgttctagattctgtt
ccagattctgttccagttcaggatatgcttcaggatattgcttatgaaccagctctggat
actccaaacactctagatactccaagcactctggatactccaaacactctggatactcca
aacactctggatactccaaacactctggatactccaaacactctagacactaaatcaagt
gtaactccatctgaccaaacttcagcctcctatcttgcctcagactccctttcttcggtg
aaggcagaacctctgactttcttatctcgttcctcccaggctataaacagatcaaattct
ccctttttcggacaggaaaactctcttccatcctcctcttcaaatcggattttcaggaca
gagcaatcttcctcctcttctgaaagaggaatattttcgagttcaagggacgagtacaaa
cactacccaggtaaaaatcctgtgaccgtagtctcagatataacaggccactcaacctgt
gtcggagaatatatgcagtttgtacaatatttcagggatagatatagcaggctttcggag
attattcgggggagaattaacgcacgccctatcgaaagcttgaaaagaagaaactttcgc
agaagagaagatgcaggttctgaggaaatctcgattataggtatggtttcggatatcaac
agcacaacaaatggtcataaaattctttctctggaagacccgacaggttctttttcagtc
cttattcgaaattccgataaagagctttttgaacttgcatcaagaattctccttgatgag
gtcataggggtggccggttcgataaccaatgacggaagcctcatgctggcaacaaagcta
atacaacccgatgtcccgaataatattcagcgcagaaccggaagccatgggaaagctgta
cttatttcggatgtgcatgtgggcagttccaagtttctggaagatgcctggctggacttc
ctggattttttgaagggagaatcggattcagatgatatgcgggaaattgcagccagtgtt
cgttatcttgttgttgcaggagatattgttgatgggatagggatctatcctgaccaggaa
ctggaacttgacattctggatgtctacgaacagtataagaaggctgcagaatatttcagg
gaaattcccgaacacattcgtgttataataagtccaggcaatcacgatgctgttcgccag
gcagaaccccagcctgccttaccggaaaatattcaggcatatttccctgagaatactgtt
tttgttggtaaccctgcttttatggagcttgacggtgtccgtcttcttatttaccacggc
agatcaattgacgatcttgtggcgagtgtccccggagtctcgtatcaggagcctgctggg
gcagttcttgaaatgctgaaacgcaggcatcttgccccgacctacgggagtagagtttcc
atatcccctgagaaaaaggattactttataattgatcctgtacctgatattattcatacg
ggccacgtccataccctgggagtccagcgctataaaaatgtccttctggtcaattccgga
acctggcaggaccagacagagtttcagaaacgtgtaaatctagtgcctgttcctgcaagg
gttccaattgtggatctagagaatttcgatgtaaagattcttgcttttgactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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