KEGG   Methanosarcina barkeri 227: MSBR2_0450
Entry
MSBR2_0450        CDS       T03914                                 
Name
(GenBank) Endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
mbar  Methanosarcina barkeri 227
Pathway
mbar03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mbar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MSBR2_0450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mbar03400]
    MSBR2_0450
Enzymes [BR:mbar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     MSBR2_0450
DNA repair and recombination proteins [BR:mbar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     MSBR2_0450
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AKB56966
UniProt: A0A0E3LPR2
Position
complement(560679..561512)
AA seq 277 aa
MPSKDLLFGTAGIPRSSKGTSSISGIKRIRELGLDCMELEFVQGVRMGEKGAKNVLEAAN
DEEVALSVHAPYYINLNSYEEKKLKASLERIYNAAKIGSLCGAESIVLHAGFYQKSSKKS
TFESISKALNELTGKFREEGIPAVLRPETMGKRTQFGTLEEVLSLSAEIEGVMPCIDFCH
LHAREGKENSYSEFTEILSKVEESLGKEGLSNMHMHVSGVEYGTSGEKRHLPLKESDLNY
PELIKTLKEFKAQGRVILESPILEEDALMLRMLYKEI
NT seq 834 nt   +upstreamnt  +downstreamnt
atgccctcgaaagatctacttttcggaaccgcaggaattccgagaagctcaaaaggaaca
agtagtatctcaggaatcaaacggatcagggaacttggccttgactgtatggagcttgaa
tttgtccagggagtacgcatgggcgaaaaaggggcaaaaaacgtcctggaagctgcaaat
gacgaagaggtagccctgagcgtccatgccccgtattatatcaacctgaattcttatgaa
gaaaaaaaattaaaagccagcctggaaagaatttacaatgccgcaaaaataggtagtctc
tgcggagccgaatcaatcgtactgcatgccggattttatcagaaaagcagcaaaaaaagc
acctttgagagcatatcaaaagccctcaacgaacttaccggaaaattccgggaagaagga
atacctgcagtcctgcgccctgaaactatgggcaaacgtacacaatttggaacgcttgaa
gaagtgctttcgctaagtgcagaaatagaaggagtcatgccctgcattgatttttgccat
ctgcatgcgagggaaggaaaggaaaactcttactctgagtttacggaaattctatcaaaa
gtagaggaaagccttggaaaggaaggactttcgaacatgcacatgcatgtctcaggagtt
gagtacggcacgagtggagaaaagaggcatctgcctttgaaagaatctgatttaaattat
cccgagcttataaaaactttaaaagaattcaaagcccaaggaagggtcatacttgagagt
cctattcttgaagaagacgcacttatgttgaggatgctttataaagagatataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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