KEGG   Candidatus Methylopumilus planktonicus: BN1208_1103
Entry
BN1208_1103       CDS       T03869                                 
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
mbat  Candidatus Methylopumilus planktonicus
Pathway
mbat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mbat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BN1208_1103 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbat03019]
    BN1208_1103 (pcnB)
Enzymes [BR:mbat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     BN1208_1103 (pcnB)
Messenger RNA biogenesis [BR:mbat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     BN1208_1103 (pcnB)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd DUF2204
Other DBs
NCBI-ProteinID: CEZ19984
UniProt: A0A0D6EX16
Position
1:1060466..1061728
AA seq 420 aa
MSATPPILKAFFKKFKKTKKSNFEIDFEKIDISLISVHAIKTIEVLEDNGFEAYLVGGAV
RDLLFGIKPKDFDVVTNATPDQIHHLFRRSRMIGRRFKLVHVIYGREVIEVSTYRSQQKE
IPQSDGSVIKDDNHYGTIEEDAMRRDFTINAMFYSPTNHKLVDFHEGLEDLKHGIIRMIG
DPEKRYQEDPIRILRAFRVCAKLNMTLHTPSRSPIKKIIPLLHDIPHSRLFDEVIKFFLT
GHALSSYKVMQDESIFAQFFLSPEFKSEEIDLFISNGLKNTDLRINQDKSCNPSFLFSFL
LWHQVYVLWDQYKAEIKHSIAGLNQAIDEVIEKQIKLFPIHKRFTITMKEIWRLQPRFEN
QSPKKIYRLLLHPRFRAAYDFMLLRCQSNQLDQSIGIWWTNFIDADNHEKSLMVKQLTRK
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgtcagcgacccctcccatactaaaagccttttttaaaaaatttaaaaaaactaaaaaa
tctaattttgaaattgatttcgaaaaaattgatatcagtcttatcagcgttcatgcaata
aaaactatagaagttctagaagacaatggctttgaggcctatcttgtgggtggggcagta
agagatcttttatttgggattaagccgaaagactttgacgtagttacaaacgctactcct
gatcaaatccatcatttatttaggcgctctagaatgattgggcgacgtttcaaattagtc
catgtgatatacggacgagaggtcatcgaagtctccacataccgctctcaacaaaaagaa
attcctcagtctgatggttccgtgattaaagatgataaccattacggcacaatagaagag
gacgcaatgcgccgtgacttcactattaatgcaatgttttacagcccaacgaatcataag
cttgttgattttcatgaggggttagaagaccttaaacatgggattattcgtatgattggt
gatccagaaaagcgctatcaagaagaccctattcgtatattgagagctttccgtgtgtgt
gcaaaacttaatatgactctgcataccccctcaagaagccctataaaaaaaattatccct
ctacttcatgacattccccattcaagactgtttgatgaagttattaaatttttcttaaca
gggcatgcattaagtagctataaagtcatgcaagatgaaagtatcttcgcgcagtttttc
ttatcaccagaatttaagtcagaagaaattgatctttttatttcgaatggtcttaaaaat
actgacttaagaattaaccaagacaagtcatgtaacccgagcttcttattttcatttttg
ttatggcatcaagtttatgtattgtgggaccaatacaaagctgagattaaacattctata
gcgggtcttaaccaagcgattgatgaagtgatcgaaaaacaaattaaacttttccctatt
cataaacgcttcacaattactatgaaagaaatatggcgattgcaaccgcgattcgaaaat
caatctccaaaaaaaatatacaggttattactccatccaagatttagagctgcatatgac
tttatgctattgcgatgtcaatctaaccagctcgaccagagtattggtatatggtggaca
aattttattgatgctgataaccatgaaaaatcgttaatggtcaaacaacttacccgtaaa
tag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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