KEGG   Candidatus Methylopumilus planktonicus: BN1208_1256
Entry
BN1208_1256       CDS       T03869                                 
Symbol
ruvB
Name
(GenBank) holliday junction helicase, subunit B
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
mbat  Candidatus Methylopumilus planktonicus
Pathway
mbat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mbat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BN1208_1256 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mbat03400]
    BN1208_1256 (ruvB)
Enzymes [BR:mbat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BN1208_1256 (ruvB)
DNA repair and recombination proteins [BR:mbat03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BN1208_1256 (ruvB)
    RecFOR pathway proteins
     BN1208_1256 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_16 Mg_chelatase Rad17 AAA_3 nSTAND3 AAA_14 AAA_18 AAA_22 DUF815 TsaE AAA_2 RNA_helicase AAA_17 NTPase_1 NB-ARC Bac_DnaA AAA_25 Sigma54_activ_2 AAA_28 IstB_IS21 bpMoxR AAA_24 AAA_33 AAA_19 NACHT ABC_tran AAA_PrkA Zeta_toxin
Other DBs
NCBI-ProteinID: CEZ20136
UniProt: A0A0D6EXC2
Position
1:complement(1208575..1209612)
AA seq 345 aa
MIESDRFVASTVNEPVEESIERALRPKELQEYVGQEKVRSQLEIFISAAKNRNEALDHVL
LFGPPGLGKTTLAHIIAKEMGVNLRQTSGPVLEKAGDLAALLTNLEPNDVLFIDEIHRLS
PVIEEILYPAMEDYRLDIMIGEGPSARSVRLDLPPFTLVGATTRAGMLTNPLRDRFGIVS
RLEFYSEIELAKIVDRSSSLLEADIDPSGSLEIAKRSRGTPRIANRLLRRVRDYAQVKSN
GKITASIADDALKMLDVDLLGLDVMDRKLLQAILEKFNGGPVGIDNLAAAIGEERETIED
VLEPYLIQQGYLMRTPRGRVVTQATYLHFGMKPPSQEPTDTLWQD
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgattgaatctgatcgttttgtagcaagtacggtgaatgagcctgttgaggaatctatt
gagcgcgcacttcgccctaaagaacttcaagaatatgtcggtcaagaaaaagtcagaagc
caattagagatttttatttcggcggctaaaaatagaaacgaagcgttagaccatgtatta
ctttttggcccacctggtttaggcaaaacgactttagctcacatcattgcaaaagagatg
ggtgtcaatcttcgccaaacatcaggccctgttttagaaaaagcaggtgacctcgcagca
cttcttactaatctagagcctaatgacgttttatttattgatgagattcatcgtttatca
cccgtcattgaagaaattttataccctgccatggaagattaccgtcttgatattatgatt
ggtgagggcccatcggctagatcagtgcgacttgatttgccaccttttacattagtgggt
gctaccacacgagcaggtatgctcaccaatccactccgtgatcgttttggtattgtctcc
cgattagaattttatagcgaaatcgaattagcaaaaattgtggatcgatcatccagtctt
ttagaagctgatattgatccctcaggctcattagaaattgcaaaacgttcacgaggcacg
cctcgcattgcaaaccgtttattaagacgtgtacgtgattacgcacaagtaaaatcaaat
ggaaaaattaccgcgtcaattgcagacgacgcactcaaaatgttggatgtggatttatta
gggctagacgtcatggaccgaaaactactccaagcgattctagaaaaatttaatggtggt
cccgtgggtattgataatttagctgcagcgattggtgaagagcgggaaaccattgaagat
gtattagagccctatcttattcaacaaggttatctcatgcgcactccgcgaggacgtgtt
gtgacacaagcgacatatcttcattttggtatgaagccaccttcacaagagccgactgat
accttatggcaggattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (34)   
   Pfam (34)   
All databases (44)   

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