KEGG   Mesomycoplasma bovoculi: MYB_00165
Entry
MYB_00165         CDS       T03034                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
mbc  Mesomycoplasma bovoculi
Pathway
mbc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mbc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MYB_00165 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbc03021]
    MYB_00165 (rpoB)
   03400 DNA repair and recombination proteins [BR:mbc03400]
    MYB_00165 (rpoB)
Enzymes [BR:mbc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MYB_00165 (rpoB)
Transcription machinery [BR:mbc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MYB_00165 (rpoB)
DNA repair and recombination proteins [BR:mbc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MYB_00165 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 RNA_pol_Rpb2_1 Peptidase_M23 Tox-REase-3
Other DBs
NCBI-ProteinID: AHH45045
UniProt: W5UTA5
Position
31820..35500
AA seq 1226 aa
MNHLYSEKTYGLTTKRRFYAKTKQTLTTPNFLDSQRDSYHWFLEEGITEAFNKIYPVFST
NGKLEISFKQGSIRVERPKDEFSSIREARQKGKSYVCRVYATLRKIQSEDGEVEEQEILL
GEIPYMTQGGTFIINGFEKIVISQLIRSPGVCYRERVRNRQADDLFNKVEIIPQLGSWIE
IFHKVTGHGVDTVKIRIDKHKNIPLITFLKAFGFVDETIKKYFGQSAPLLESLKKHKVNG
VEENLEQIYRIIRKDDRITEEGLKNFIPSIIFNERRYNLSKTGRYMLNNKLNLIERITQT
YLAQDLIDKNGDLVYAKKTFITRQMAVDIQKKFEDGSFEFSSIDGIDENVYGRQLQINRN
TDLSSRTKVISVKVWPNKRAMSQDQEPILVIGNDPTSNETTLLISDIVAIVSYYFNLISN
IGKNDDPDSLINKRIVGVGELLQNQFLIALNKMEKNTKERISSRAEIDKITVKSVINNKP
IYNQFKNFFNSSKLSQFMDQINPLGEMASKRRVTSLGPGGLNRETAQFEVRDVHATHYGR
ICPVETPEGQNIGLILNYSVFAKTNPYGFILTPYFKVNNRVVDYSQPHWLTAAEEFGLTF
AQSSLPINEKNEIIADKVTVRKNQTFIVVDANEIDYIDVSSMQMTSISASAIPFLENNDA
NRALMGSNMQRQAVPLIKAESPFVATGIESDVALYSSTNIRSETDGVVTFVDSKKIIVTD
EEDNEHTYYLRHFEKSNQETLILQKPIVSLGQQVKKGQLICDGPSTDKGELALGKNVLVA
FTTWNGYNYEDAIIISERLVKDDVFTSIHIQEQTIKFRSTKAGTDILTAEVPNTSAKSRS
HLDANGIVRVGSEVNTGDILVGRTSPKGEDNPTPEDRLIVTIWGKKALAQKDTSLRVKHG
EGGTVIDVQVLSRENGDTLEDGVGMLVKVLIAQKRKIKVGDKMAGRHGNKGVVSIVLPVE
DMPFLEDGTPVDILLNPQGVPSRMNIGQVLELHLGMVAKNLNTRFVTPVFDGIKPDTMKS
LFQEASMPESGKFKLYDGITGKAFDKEVSVGYMYMLKLQHMVDDKMHARAVGPYSLTTQQ
PLGGKSQNGGQRFGEMETWALESFGATTVLSELLTYKSDNIVGRNSLYNNLISGGKLPRP
GTPESFNVLAYELRGLLIKLEVHKKENANDAEFDVLAPNKKPVEYVDHIEDEYPFDEAFS
DEGRTSLESDFEDVDEENEDFDEDSY
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgaatcatttatatagtgaaaaaacttatggtttaaccactaaaagacggttttatgca
aaaaccaaacaaacacttactacacctaactttttagattctcaacgtgattcatatcat
tggtttttagaagaagggattactgaagcttttaacaaaatttatcctgttttttcaaca
aatggaaaattagaaattagttttaagcaaggttctattagagtagaaagaccaaaagat
gaattttcaagcattcgcgaagctcgtcaaaaaggtaaatcatatgtttgtcgtgtttat
gcaacacttagaaaaattcagtcagaagatggggaagtggaagaacaagaaattctttta
ggtgaaattccttacatgactcaaggtggaacattcattatcaatggttttgaaaaaatt
gttatttcacaattaattcgttcacctggagtttgttatcgtgaaagagttcgtaatcgt
caagcagacgatcttttcaacaaggttgaaattattccacaactaggttcctgaattgaa
atttttcacaaagttacaggtcatggtgttgatactgttaaaattcgtatcgataagcat
aaaaatattcctttaattacatttttaaaagcttttggttttgttgatgaaactattaaa
aaatactttggtcaatcagcaccacttttagagtctcttaaaaaacacaaagtaaatggt
gttgaagaaaacttagaacagatttaccgtattattcgtaaagatgacagaattacagaa
gagggattgaaaaattttatcccatctataatttttaatgagcgtcgttacaatttatct
aaaactggtcgttatatgctcaataacaaactcaatttaattgagcgtattactcaaact
tatttagcacaagatttgattgataaaaatggtgatttagtttatgctaaaaaaaccttt
attacaagacaaatggcagttgatattcaaaaaaaattcgaagatggaagttttgaattt
tcatcaattgatggaattgatgaaaacgtttatgggcgtcaattgcaaattaatagaaat
actgatttgtctagtcgtacaaaggttatttctgttaaagtttgaccaaataaaagagct
atgtcacaggatcaagaaccaattttagttattggaaatgatccaacttcaaatgaaact
actcttttaatttctgatatagttgcaatcgtttcatactattttaacttaatttcaaac
attggtaaaaatgatgacccagattcattaattaacaaacgaattgttggtgttggtgaa
ctattgcaaaatcaatttttaattgctcttaacaaaatggaaaaaaataccaaagagcgt
atttcatctagagctgaaattgataaaatcacagttaaaagtgttattaataacaaacca
atttacaaccaatttaaaaactttttcaactcatctaaactttcacaatttatggaccaa
attaatccattaggtgaaatggcaagtaaaagaagggtgacatctttagggcctggtggg
ctaaatagagaaactgctcaatttgaggttcgtgacgttcatgcaactcactatggacgc
atttgtccagttgaaacacctgagggtcaaaacattggtttgattcttaactatagtgtt
tttgcaaaaactaatccttatggattcattttaactccttactttaaagtaaataataga
gttgttgattattcacaaccacactgattaactgcagctgaagaatttggactaactttt
gctcaatcttcattgccaattaatgaaaaaaatgaaataattgctgacaaagttacagtt
agaaaaaatcaaacttttattgttgttgatgcaaatgaaattgattacattgatgtttca
tcaatgcaaatgacttcaatttcagctagtgcaattccatttttggaaaacaacgatgcg
aaccgggcacttatgggttctaacatgcaacgtcaagccgtgcctttgattaaagcggaa
tcaccttttgtggccacagggattgaatcagatgttgctctttattcatcaactaatatt
cgttctgaaacagatggtgtagtcacctttgttgattctaaaaaaatcattgtaactgat
gaagaagataatgaacatacttattatcttcgccattttgaaaaatctaaccaagaaact
ttgatcttacaaaaaccaattgtttctcttggtcaacaagttaaaaaaggtcaacttatt
tgtgatggaccatcaactgacaaaggtgaattagcacttgggaaaaatgttttagtagcc
tttacaacttgaaatggttacaactatgaagatgcgattatcattagtgaacgtttagtt
aaagatgatgtgttcacttcaattcacattcaagaacaaactattaaattccgttctact
aaagctggaactgatattttaactgctgaagtgccaaacacatcagcaaaatcaagatca
catcttgacgctaatggaattgttcgtgttggttctgaagttaatacaggtgacatttta
gttggacgtacttcaccaaaaggtgaagacaatccaactcctgaagatcgtttgattgtt
actatttgaggtaaaaaagcacttgcccaaaaagatacttcacttcgtgtaaaacacggt
gaaggtggaactgttatcgatgttcaagttctttcacgtgaaaatggcgacacacttgaa
gatggtgtgggaatgcttgttaaagttttaattgctcaaaaacgtaaaattaaagttggg
gacaaaatggctgggcgccatggaaacaaaggggttgtttcaattgtattgccagttgaa
gatatgccatttttagaagatggaactccagttgatatcctcttgaacccacaaggggtg
ccatctcggatgaatattggacaagttcttgaacttcaccttggaatggttgctaaaaat
ctaaacactagatttgtaactcctgtttttgatggaattaaaccagacacaatgaaatca
ttattccaagaagctagcatgcctgaatcaggaaaattcaaactttatgatggaattact
ggaaaagcttttgacaaagaagtttcagttggttatatgtatatgcttaaattgcagcat
atggttgatgacaaaatgcacgctcgtgctgttggtccttactcacttacaactcaacaa
ccacttggagggaagtcacaaaacggaggacaaagatttggtgaaatggaaacatgagca
cttgaatcttttggagcaaccaccgttttatctgaacttctaacctataaatcagataat
attgttggacgtaatagtctttacaataatttaatttcaggtggaaaacttccacgtcca
ggaacccctgagtcctttaatgtgcttgcatatgaacttcgtggtttgttaataaaactt
gaagttcataaaaaagaaaatgcgaatgatgctgaatttgatgtgctcgcaccaaacaaa
aaaccagttgagtatgtcgaccacattgaggatgaatatccatttgatgaagcctttagt
gatgaaggtagaacatccctagaatctgacttcgaagatgttgatgaagaaaacgaagac
tttgatgaagattcatattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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